RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SYCP3Q8IZU3 236 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 AFAP1L1Q8TED9 768 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 TRAPPC12Q8WVT3 735 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
CPNE4-213ENST00000515418 RNPEPQ9H4A4 650 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 TYW1Q9NV66 732 aaKnown RBP10.07□□□□□ -0.8
CPNE4-213ENST00000515418 HTTP42858 3142 aa10.07□□□□□ -0.8
CPNE4-213ENST00000515418 CETN3O15182 167 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CA12O43570 354 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CALUO43852 315 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 LGR5O75473 907 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 PPP1R37O75864 691 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 AKAP3O75969 853 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 SFPQP23246 707 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CASP14P31944 242 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CYP2J2P51589 502 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 GSDMDP57764 484 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 IRX5P78411 483 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CCZ1BP86790 482 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CCZ1P86791 482 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 DRP2Q13474 957 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 LAMC2Q13753 1193 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 EMC2Q15006 297 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 PLCB4Q15147 1175 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 TARBP2Q15633 366 aaKnown RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 DEFB115Q30KQ5 88 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 EDRF1Q3B7T1 1238 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 VWA3BQ502W6 1294 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 USP6NLQ92738 828 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CEP63Q96MT8 703 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 POLR3FQ9H1D9 316 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 NDST4Q9H3R1 872 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 ABHD16BQ9H3Z7 469 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 ATP6V0A4Q9HBG4 840 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 USP20Q9Y2K6 914 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 RASSF10A6NK89 507 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 ZBTB42B2RXF5 422 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 TNPO2O14787 897 aaKnown RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 TBC1D8O95759 1140 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 GH1P01241 217 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 ZNF286BP0CG31 522 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 DNM2P50570 870 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 GTF2BQ00403 316 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CAP1Q01518 475 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 SYCP1Q15431 976 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 FOXR2Q6PJQ5 311 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 PPP4R3CPQ6ZMV5 832 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 PLPPR4Q7Z2D5 763 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 ZC3H3Q8IXZ2 948 aaKnown RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 TC2NQ8N9U0 490 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 RDH13Q8NBN7 331 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 TMEM161BQ8NDZ6 487 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 ZSWIM2Q8NEG5 633 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 MCPH1Q8NEM0 835 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 KIAA1524Q8TCG1 905 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 PPP1R13LQ8WUF5 828 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 KIFAP3Q92845 792 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 LENG1Q96BZ8 264 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 HHIPL1Q96JK4 782 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CAPNS2Q96L46 248 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 TIPINQ9BVW5 301 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 GBP3Q9H0R5 595 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 DHX33Q9H6R0 707 aaKnown RBP10.06□□□□□ -0.8
CPNE4-213ENST00000515418 SUGCTQ9HAC7 445 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 KMT5AQ9NQR1 393 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 SLC5A4Q9NY91 659 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 ZSWIM8A7E2V4 1837 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 ADGRA3Q8IWK6 1321 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 CEP350Q5VT06 3117 aa10.06□□□□□ -0.8
CPNE4-213ENST00000515418 DENND3A2RUS2 1198 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 ANKRD63C9JTQ0 380 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 DYNC1LI2O43237 492 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 GYPCP04921 128 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 TPM2P07951 284 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 SMTNP53814 917 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 HTRA3P83110 453 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 TNFAIP2Q03169 654 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 DMP1Q13316 513 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 MAN2A1Q16706 1144 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 DUSP28Q4G0W2 176 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 STXBP4Q6ZWJ1 553 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 PPFIBP1Q86W92 1011 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 LRRC71Q8N4P6 559 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 ASAP3Q8TDY4 903 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 SLC7A3Q8WY07 619 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 ACCSQ96QU6 501 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 NTPCRQ9BSD7 190 aaKnown RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 SMARCAD1Q9H4L7 1026 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 AGPAT3Q9NRZ7 376 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 LGALS2P05162 132 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 MAPTP10636 758 aaKnown RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 GLRA2P23416 452 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 RPL13P26373 211 aaKnown RBP10.05□□□□□ -0.8
CPNE4-213ENST00000515418 PSMC4P43686 418 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
CPNE4-213ENST00000515418 IGBP1P78318 339 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms