RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 PHLDB3Q6NSJ2 640 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 ECHDC2Q86YB7 292 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 TMEM87AQ8NBN3 555 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 TMEM169Q96HH4 297 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 SFXN1Q9H9B4 322 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 KCNH7Q9NS40 1196 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 EVPLQ92817 2033 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 USP24Q9UPU5 2620 aa13.5□□□□□ -0.25
CSF1R-208ENST00000515239 IGKV6D-21A0A0A0MT36 114 aa13.49□□□□□ -0.25
CSF1R-208ENST00000515239 HBP1O60381 514 aa13.49□□□□□ -0.25
CSF1R-208ENST00000515239 CTSAP10619 480 aa13.49□□□□□ -0.25
CSF1R-208ENST00000515239 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
CSF1R-208ENST00000515239 DDX53Q86TM3 631 aaKnown RBP13.49□□□□□ -0.25
CSF1R-208ENST00000515239 ZNF598Q86UK7 904 aaKnown RBP13.49□□□□□ -0.25
CSF1R-208ENST00000515239 GPR161Q8N6U8 529 aaKnown RBP13.49□□□□□ -0.25
CSF1R-208ENST00000515239 DSCC1Q9BVC3 393 aa13.49□□□□□ -0.25
CSF1R-208ENST00000515239 NFASCO94856 1347 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
CSF1R-208ENST00000515239 VTNP04004 478 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 ADRB1P08588 477 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 SRFP11831 508 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 RFX1P22670 979 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 TGM1P22735 817 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 SLC26A2P50443 739 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 CWC27Q6UX04 472 aaKnown RBP13.48□□□□□ -0.25
CSF1R-208ENST00000515239 C15orf39Q6ZRI6 1047 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 HELQQ8TDG4 1101 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 GPR152Q8TDT2 470 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 BCL7CQ8WUZ0 217 aaPredicted RBP13.48□□□□□ -0.25
CSF1R-208ENST00000515239 RILPL2Q969X0 211 aa13.48□□□□□ -0.25
CSF1R-208ENST00000515239 RALYQ9UKM9 306 aaKnown RBP13.48□□□□□ -0.25
CSF1R-208ENST00000515239 C2orf16Q68DN1 1984 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 ATRXP46100 2492 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 A0A0U1RQF3 1178 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 PRR5-ARHGAP8B1AHC4 643 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 LRRN2O75325 713 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
CSF1R-208ENST00000515239 CLCN4P51793 760 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 ARHGAP8P85298 464 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 WTAPQ15007 396 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 ZNF528Q3MIS6 628 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 ZNF484Q5JVG2 852 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 RNF169Q8NCN4 708 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 BORCS6Q96GS4 357 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 IGSF21Q96ID5 467 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 KLHL5Q96PQ7 755 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 MXRA8Q9BRK3 442 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 VN1R3Q9BXE9 311 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 PSTPIP2Q9H939 334 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 NCDNQ9UBB6 729 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 EPS15L1Q9UBC2 864 aa13.47□□□□□ -0.25
CSF1R-208ENST00000515239 COL1A2P08123 1366 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 IFIT3O14879 490 aaKnown RBP13.46□□□□□ -0.25
CSF1R-208ENST00000515239 C22orf31O95567 290 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 CCNE2O96020 404 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 ATP4AP20648 1035 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 GBP2P32456 591 aaPredicted RBP13.46□□□□□ -0.25
CSF1R-208ENST00000515239 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
CSF1R-208ENST00000515239 NONOQ15233 471 aaKnown RBP eCLIP13.46□□□□□ -0.25
CSF1R-208ENST00000515239 PTPN14Q15678 1187 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 UBE2SQ16763 222 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 ABHD15Q6UXT9 468 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 NXPE3Q969Y0 559 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
CSF1R-208ENST00000515239 MYADMQ96S97 322 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 SDF4Q9BRK5 362 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 RTKNQ9BST9 563 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 MRPL9Q9BYD2 267 aaKnown RBP13.46□□□□□ -0.25
CSF1R-208ENST00000515239 FOXQ1Q9C009 403 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 WDR6Q9NNW5 1121 aaKnown RBP13.46□□□□□ -0.25
CSF1R-208ENST00000515239 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 PCDHA6Q9UN73 950 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 PCDHA8Q9Y5H6 950 aa13.46□□□□□ -0.25
CSF1R-208ENST00000515239 LILRB3O75022 631 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 GALTP07902 379 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 CNPP09543 421 aaKnown RBP13.45□□□□□ -0.26
CSF1R-208ENST00000515239 KLRC2P26717 231 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 SMARCA1P28370 1054 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 NLRP11P59045 1033 aaKnown RBP13.45□□□□□ -0.26
CSF1R-208ENST00000515239 STARD6P59095 220 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 LMNB2Q03252 620 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 DCLRE1AQ6PJP8 1040 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 CCDC60Q8IWA6 550 aaPredicted RBP13.45□□□□□ -0.26
CSF1R-208ENST00000515239 METTL13Q8N6R0 699 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 CMASQ8NFW8 434 aaPredicted RBP13.45□□□□□ -0.26
CSF1R-208ENST00000515239 PJA1Q8NG27 643 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
CSF1R-208ENST00000515239 FBXO4Q9UKT5 387 aa13.45□□□□□ -0.26
CSF1R-208ENST00000515239 CDV3Q9UKY7 258 aaKnown RBP13.45□□□□□ -0.26
CSF1R-208ENST00000515239 SPDYE3A6NKU9 549 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 BACH1O14867 736 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 SPTLC1O15269 473 aa13.44□□□□□ -0.26
CSF1R-208ENST00000515239 ZC3H11AO75152 810 aaKnown RBP eCLIP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms