RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 USP11P51784 963 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 RBM10P98175 930 aaKnown RBP16.99■□□□□ 0.31
DDR1-278ENST00000515233 NTRK3Q16288 839 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 KCNT2Q6UVM3 1135 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 CENPQQ7L2Z9 268 aaPredicted RBP16.99■□□□□ 0.31
DDR1-278ENST00000515233 ECHDC2Q86YB7 292 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 PBXIP1Q96AQ6 731 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 MAP7D2Q96T17 732 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 RIT2Q99578 217 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 RNF26Q9BY78 433 aaPredicted RBP16.99■□□□□ 0.31
DDR1-278ENST00000515233 S1PR5Q9H228 398 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 DISC1Q9NRI5 854 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 AKT3Q9Y243 479 aa16.99■□□□□ 0.31
DDR1-278ENST00000515233 A0A0U1RQF3 1178 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 MSH4O15457 936 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 EOMESO95936 686 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 OATP04181 439 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 HSPA4P34932 840 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 PPM1AP35813 382 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
DDR1-278ENST00000515233 KRT17Q04695 432 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 ANKRD54Q6NXT1 300 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 SKAP1Q86WV1 359 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 CCDC148Q8NFR7 591 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 PHKBQ93100 1093 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 RPGRIP1Q96KN7 1286 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 PRRX2Q99811 253 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
DDR1-278ENST00000515233 DARSP14868 501 aaKnown RBP16.97■□□□□ 0.31
DDR1-278ENST00000515233 IFNAR1P17181 557 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 HOXB8P17481 243 aaPredicted RBP16.97■□□□□ 0.31
DDR1-278ENST00000515233 SFNP31947 248 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 GPC3P51654 580 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 EVCP57679 992 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 CDC42EP1Q00587 391 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 PLPP4Q5VZY2 271 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 ABI1Q8IZP0 508 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 LRRC43Q8N309 656 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 LRRC71Q8N4P6 559 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
DDR1-278ENST00000515233 ZNF558Q96NG5 402 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 SNX14Q9Y5W7 946 aa16.97■□□□□ 0.31
DDR1-278ENST00000515233 TECP42680 631 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 JAK3P52333 1124 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 SIGLEC14Q08ET2 396 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 TARBP2Q15633 366 aaKnown RBP16.96■□□□□ 0.31
DDR1-278ENST00000515233 SYCE2Q6PIF2 218 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 TMC7Q7Z402 723 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 ZNF598Q86UK7 904 aaKnown RBP16.96■□□□□ 0.31
DDR1-278ENST00000515233 SLC5A5Q92911 643 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 CCDC136Q96JN2 1154 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 ENTPD7Q9NQZ7 604 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 SH3GLB2Q9NR46 395 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 SPG21Q9NZD8 308 aa16.96■□□□□ 0.31
DDR1-278ENST00000515233 HIDE1A8MVS5 230 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 RPS6KB1P23443 525 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 PRKCEQ02156 737 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 TBC1D8BQ0IIM8 1120 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 CLLU1OSQ5K130 101 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 SUGP1Q8IWZ8 645 aaKnown RBP16.95■□□□□ 0.3
DDR1-278ENST00000515233 SLC39A11Q8N1S5 342 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 FBXL6Q8N531 539 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 MRPL43Q8N983 215 aaKnown RBP16.95■□□□□ 0.3
DDR1-278ENST00000515233 RDM1Q8NG50 284 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 RSPH1Q8WYR4 309 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 TRAIPQ9BWF2 469 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 TEKT3Q9BXF9 490 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 NIFKQ9BYG3 293 aaKnown RBP16.95■□□□□ 0.3
DDR1-278ENST00000515233 CHST12Q9NRB3 414 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
DDR1-278ENST00000515233 GAS7O60861 476 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 PSMD10O75832 226 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 PDIA3P30101 505 aaKnown RBP16.94■□□□□ 0.3
DDR1-278ENST00000515233 UGCGQ16739 394 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 Q4G0T1 1027 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 IER5LQ5T953 404 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 LRCH2Q5VUJ6 765 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 B3GNT9Q6UX72 402 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 PRSS33Q8NF86 280 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 ASIC4Q96FT7 647 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 ZNF668Q96K58 619 aaPredicted RBP16.94■□□□□ 0.3
DDR1-278ENST00000515233 CEP89Q96ST8 783 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 SLC26A6Q9BXS9 759 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 MRPL9Q9BYD2 267 aaKnown RBP16.94■□□□□ 0.3
DDR1-278ENST00000515233 C22orf23Q9BZE7 217 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 UNC45AQ9H3U1 944 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 VPS54Q9P1Q0 977 aa16.94■□□□□ 0.3
DDR1-278ENST00000515233 CYP3A7-CYP3A51PA0A087WV96 503 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 IGKV6-21A0A0C4DH24 114 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 CYP3A7P24462 503 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 PSMA5P28066 241 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 PBX3P40426 434 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 PTPN5P54829 565 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 NLRP5P59047 1200 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 SMC1AQ14683 1233 aaKnown RBP16.93■□□□□ 0.3
DDR1-278ENST00000515233 PTPN21Q16825 1174 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 XKR3Q5GH77 459 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 HELQQ8TDG4 1101 aa16.93■□□□□ 0.3
DDR1-278ENST00000515233 TBCKQ8TEA7 893 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms