RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TAF6LQ9Y6J9 622 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 TEX33O43247 280 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 CTIFO43310 598 aaKnown RBP17.15■□□□□ 0.34
TRIM41-207ENST00000515223 CLTAP09496 248 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 TFDP2Q14188 446 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 PADI6Q6TGC4 694 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 TRIM67Q6ZTA4 783 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 PIGOQ8TEQ8 1089 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 DDX27Q96GQ7 796 aaKnown RBP17.15■□□□□ 0.34
TRIM41-207ENST00000515223 PRDM5Q9NQX1 630 aaPredicted RBP17.15■□□□□ 0.34
TRIM41-207ENST00000515223 LCMT1Q9UIC8 334 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 STAP1Q9ULZ2 295 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L15C9J2P7 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L13C9JLJ4 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L11C9JVI0 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L18D6R9N7 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L22D6RA61 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L17D6RBQ6 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L19D6RCP7 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L20D6RJB6 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 USP17L24Q0WX57 530 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 PPP6R3Q5H9R7 873 aaPredicted RBP17.15■□□□□ 0.34
TRIM41-207ENST00000515223 XXYLT1Q8NBI6 393 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 MRFAP1Q9Y605 127 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 CA4P22748 312 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 E2F5Q15329 346 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 BBS9Q3SYG4 887 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 LBHD1Q9BQE6 289 aaPredicted RBP17.15■□□□□ 0.34
TRIM41-207ENST00000515223 EFHD1Q9BUP0 239 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 NDST4Q9H3R1 872 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 GPC3P51654 580 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 SNCBQ16143 134 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 RHOT2Q8IXI1 618 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 TMEM47Q9BQJ4 181 aa17.15■□□□□ 0.34
TRIM41-207ENST00000515223 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
TRIM41-207ENST00000515223 MCAMP43121 646 aa17.14■□□□□ 0.34
TRIM41-207ENST00000515223 SPATA33Q96N06 139 aa17.14■□□□□ 0.34
TRIM41-207ENST00000515223 IRX2Q9BZI1 471 aaPredicted RBP17.14■□□□□ 0.34
TRIM41-207ENST00000515223 FIS1Q9Y3D6 152 aa17.14■□□□□ 0.34
TRIM41-207ENST00000515223 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 RPSAP08865 295 aaKnown RBP17.14■□□□□ 0.33
TRIM41-207ENST00000515223 KCNJ6P48051 423 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 KCNV1Q6PIU1 500 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 AFG1LQ8WV93 481 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 HSPH1Q92598 858 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 IFT43Q96FT9 208 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 ZWILCHQ9H900 591 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 GDAQ9Y2T3 454 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 NEDD4P46934 1319 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 NOP14P78316 857 aaKnown RBP17.14■□□□□ 0.33
TRIM41-207ENST00000515223 SLMAPQ14BN4 828 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 TAF1BQ53T94 588 aaPredicted RBP17.14■□□□□ 0.33
TRIM41-207ENST00000515223 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 RHPN2Q8IUC4 686 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 MAGEB5Q9BZ81 275 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 LLGL1Q15334 1064 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 PDCD6IPQ8WUM4 868 aaKnown RBP17.14■□□□□ 0.33
TRIM41-207ENST00000515223 PPWD1Q96BP3 646 aaKnown RBP17.14■□□□□ 0.33
TRIM41-207ENST00000515223 KLC2Q9H0B6 622 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 KLHL8Q9P2G9 620 aaPredicted RBP17.14■□□□□ 0.33
TRIM41-207ENST00000515223 HDAC6Q9UBN7 1215 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 MROH7-TTC4A0A0A0MT08 1334 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 AP5Z1O43299 807 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 RCN2Q14257 317 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 TMCO4Q5TGY1 634 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 ASNSD1Q9NWL6 643 aa17.14■□□□□ 0.33
TRIM41-207ENST00000515223 SFI1A8K8P3 1242 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 CYP27B1O15528 508 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 TAC1P20366 129 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 GGCXP38435 758 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 EIF4A3P38919 411 aaKnown RBP17.13■□□□□ 0.33
TRIM41-207ENST00000515223 RWDD2BP57060 319 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 EN1Q05925 392 aaPredicted RBP17.13■□□□□ 0.33
TRIM41-207ENST00000515223 ZNF394Q53GI3 561 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 SHC4Q6S5L8 630 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 ABHD10Q9NUJ1 306 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 TADA3O75528 432 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
TRIM41-207ENST00000515223 CPB1P15086 417 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 QARSP47897 775 aaKnown RBP17.13■□□□□ 0.33
TRIM41-207ENST00000515223 PHEXP78562 749 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 TMED2Q15363 201 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 TRIM68Q6AZZ1 485 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 TTC30BQ8N4P2 665 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 FSD1LQ9BXM9 530 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 TAF1CQ15572 869 aaPredicted RBP17.13■□□□□ 0.33
TRIM41-207ENST00000515223 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
TRIM41-207ENST00000515223 FRA10AC1Q70Z53 315 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 BANK1Q8NDB2 785 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 OXER1Q8TDS5 423 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 GBP5Q96PP8 586 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 IPO5O00410 1097 aaKnown RBP17.13■□□□□ 0.33
TRIM41-207ENST00000515223 TJP3O95049 919 aa17.13■□□□□ 0.33
TRIM41-207ENST00000515223 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms