RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GABPAQ06546 454 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 RBL2Q08999 1139 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 BRD3Q15059 726 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 C10orf62Q5T681 223 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 USP17L2Q6R6M4 530 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 ITIH6Q6UXX5 1313 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 TTC39CQ8N584 583 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 CCDC148Q8NFR7 591 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 PYM1Q9BRP8 204 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 DRC3Q9H069 523 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 C15orf41Q9Y2V0 281 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 A0A0U1RQJ8 604 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 POTEFA5A3E0 1075 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 HTR3EA5X5Y0 456 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 TEX28O15482 410 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 EDIL3O43854 480 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 RNF40O75150 1001 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 LUC7L3O95232 432 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 KRT31Q15323 416 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 SLC2A7Q6PXP3 512 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 RAD9BQ6WBX8 426 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 PAF1Q8N7H5 531 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 KIFC2Q96AC6 838 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 SNX27Q96L92 541 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 PANX2Q96RD6 677 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 CRAMP1Q96RY5 1269 aa8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 MRPL44Q9H9J2 332 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-219ENST00000514743 IGKV6D-41A0A0C4DH26 115 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 A6NHS1 94 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 SOWAHDA6NJG2 315 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 RNF225M0QZC1 329 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 MFAP3LO75121 409 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 UPP2O95045 317 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 POTEIP0CG38 1075 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PRCPP42785 496 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PPIDQ08752 370 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 BNIP1Q12981 228 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 SLC44A4Q53GD3 710 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 RRAGBQ5VZM2 374 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 DAAM2Q86T65 1068 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 LILRB2Q8N423 598 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 CERS5Q8N5B7 392 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 IGSF22Q8N9C0 903 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 WDR24Q96S15 920 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 FAM167BQ9BTA0 163 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 NUP58Q9BVL2 599 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 CCSER1Q9C0I3 900 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 KBTBD4Q9NVX7 518 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 SUCLA2Q9P2R7 463 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 TMA7Q9Y2S6 64 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 TTLL3Q9Y4R7 772 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 LRRIQ3A6PVS8 624 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 AKR1B15C9JRZ8 316 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 STAT6P42226 847 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 FXR1P51114 621 aaKnown RBP eCLIP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PMS1P54277 932 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 GNG11P61952 73 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 IFFO1Q0D2I5 559 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PAK1Q13153 545 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 CCBE1Q6UXH8 406 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 DTHD1Q6ZMT9 781 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 MAML3Q96JK9 1138 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 NDNQ99608 321 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 DDX4Q9NQI0 724 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 TBK1Q9UHD2 729 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 L3MBTL1Q9Y468 752 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 TRIM49BA6NDI0 452 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 USP17L5A8MUK1 530 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 LAD1O00515 517 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 CCDC166P0CW27 439 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 SNHG28P0DPA3 235 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 IDO1P14902 403 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PLCG2P16885 1265 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PSMC4P43686 418 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PLOD1Q02809 727 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 SEPT2Q15019 361 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 P3H1Q32P28 736 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 TCP11X2Q5H9J9 407 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 SLC27A3Q5K4L6 730 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 SPDYCQ5MJ68 293 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 BEND6Q5SZJ8 279 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 ALKBH2Q6NS38 261 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 ADSSL1Q8N142 457 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 NDUFAF2Q8N183 169 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 ESX1Q8N693 406 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 LILRB1Q8NHL6 650 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 NELFBQ8WX92 580 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PIGSQ96S52 555 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 PDGFDQ9GZP0 370 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 RIOX1Q9H6W3 641 aa8.08□□□□□ -1.12
PDLIM5-219ENST00000514743 SLX4Q8IY92 1834 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 CASP14P31944 242 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 CCT6AP40227 531 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 C10orf76Q5T2E6 689 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 CABP7Q86V35 215 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 VPS52Q8N1B4 723 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 TNIP2Q8NFZ5 429 aa8.07□□□□□ -1.12
PDLIM5-219ENST00000514743 CDK5RAP3Q96JB5 506 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms