RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 UBE2TQ9NPD8 197 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-213ENST00000514442 COX16Q9P0S2 106 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 PPP1R9AQ9ULJ8 1098 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 SNX12Q9UMY4 172 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 LGALS16A8MUM7 142 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 TFAMQ00059 246 aaKnown RBP14.13□□□□□ -0.15
TCOF1-213ENST00000514442 SFR1Q86XK3 245 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 MMGT1Q8N4V1 131 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 SLC10A4Q96EP9 437 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 RUNDC3BQ96NL0 473 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 SKAP2O75563 359 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-213ENST00000514442 STK10O94804 968 aaKnown RBP14.13□□□□□ -0.15
TCOF1-213ENST00000514442 GAS8O95995 478 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 SRGAP2CP0DJJ0 459 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 NT5C2P49902 561 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 COG7P83436 770 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 C6orf118Q5T5N4 469 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 CCDC117Q8IWD4 279 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-213ENST00000514442 TMEM206Q9H813 350 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 VPS37BQ9H9H4 285 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 POTEFA5A3E0 1075 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 PPFIA2O75334 1257 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 KRT14P02533 472 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 PRCPP42785 496 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 IL9RQ01113 521 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 KRT81Q14533 505 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 KIF22Q14807 665 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 POTEGQ6S5H5 508 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 POTEEQ6S8J3 1075 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 CAPN12Q6ZSI9 719 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 TRAPPC11Q7Z392 1133 aa14.13□□□□□ -0.15
TCOF1-213ENST00000514442 GRID2IPA4D2P6 1211 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 RAD23BP54727 409 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 APLFQ8IW19 511 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-213ENST00000514442 DYDC2Q96IM9 177 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 TAF1DQ9H5J8 278 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-213ENST00000514442 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 COL3A1P02461 1466 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-213ENST00000514442 ARHGEF28Q8N1W1 1705 aaKnown RBP14.12□□□□□ -0.15
TCOF1-213ENST00000514442 THAP12O43422 761 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 HSP90AA5PQ58FG0 334 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 UNC13DQ70J99 1090 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 FMO2Q99518 471 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 ZMYND12Q9H0C1 365 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 ATP5HO75947 161 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 BAG2O95816 211 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 SCTRP47872 440 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 NBPF20Q3BBV1 942 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 RAD54LQ92698 747 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 KCNB2Q92953 911 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 HESX1Q9UBX0 185 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 TTC26A0AVF1 554 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 MMP14P50281 582 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 FXR1P51114 621 aaKnown RBP eCLIP14.12□□□□□ -0.15
TCOF1-213ENST00000514442 DDR1Q08345 913 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 ADCY2Q08462 1091 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 NCAPHQ15003 741 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 TRIM10Q9UDY6 481 aa14.12□□□□□ -0.15
TCOF1-213ENST00000514442 FAF1Q9UNN5 650 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-213ENST00000514442 PALM3A6NDB9 673 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 NDC80O14777 642 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 NOL3O60936 208 aaKnown RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 LMNB1P20700 586 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 CFAP157Q5JU67 520 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 ZC3H18Q86VM9 953 aaKnown RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 NLRP7Q8WX94 980 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 ZNF653Q96CK0 615 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 HAUS1Q96CS2 278 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 RNF181Q9P0P0 153 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 NXF1Q9UBU9 619 aaKnown RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 MCM8Q9UJA3 840 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 DAAM1Q9Y4D1 1078 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 DEPDC5O75140 1603 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 CCT8L1PA6NM43 557 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 ABL1P00519 1130 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 MXI1P50539 228 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 RSAD2Q8WXG1 361 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 NLRP4Q96MN2 994 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 RNF146Q9NTX7 359 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 STOML1Q9UBI4 398 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 KDM6AO15550 1401 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 CAPN9O14815 690 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 SYF2O95926 243 aaKnown RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 KRT15P19012 456 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 ADCY8P40145 1251 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 TMED1Q13445 227 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 NUGGCQ68CJ6 796 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 SLC17A8Q8NDX2 589 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 KIF20BQ96Q89 1820 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 CNTNAP4Q9C0A0 1308 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 ANP32DO95626 131 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 PRELPP51888 382 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 MRPS35P82673 323 aaKnown RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 LRRC63Q05C16 580 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 LAMB3Q13751 1172 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 FBXO33Q7Z6M2 555 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms