RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ATP2C1P98194 919 aaPredicted RBP10.86□□□□□ -0.67
RNF4-221ENST00000513643 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 POU5F1BQ06416 359 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 PAK2Q13177 524 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 TMEM266Q2M3C6 531 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 PPP2R2DQ66LE6 453 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 OTUD6AQ7L8S5 288 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 ZNF410Q86VK4 478 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 TPH2Q8IWU9 490 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 MYOCDQ8IZQ8 938 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 CEP170P1Q96L14 293 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 MAP7D2Q96T17 732 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 PRDM12Q9H4Q4 367 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 SUGCTQ9HAC7 445 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 IFT122Q9HBG6 1241 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 SUCLA2Q9P2R7 463 aaPredicted RBP10.86□□□□□ -0.67
RNF4-221ENST00000513643 NOL7Q9UMY1 257 aaKnown RBP10.86□□□□□ -0.67
RNF4-221ENST00000513643 GBF1Q92538 1859 aa10.86□□□□□ -0.67
RNF4-221ENST00000513643 TTC28Q96AY4 2481 aa10.85□□□□□ -0.67
RNF4-221ENST00000513643 PRRC2BQ5JSZ5 2229 aaKnown RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 CUL9Q8IWT3 2517 aa10.85□□□□□ -0.67
RNF4-221ENST00000513643 K7ELQ4 463 aaPredicted RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 GAS2O43903 313 aaKnown RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 ARL2P36404 184 aa10.85□□□□□ -0.67
RNF4-221ENST00000513643 ECM1Q16610 540 aa10.85□□□□□ -0.67
RNF4-221ENST00000513643 ODR4Q5SWX8 454 aa10.85□□□□□ -0.67
RNF4-221ENST00000513643 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
RNF4-221ENST00000513643 PRPF31Q8WWY3 499 aaKnown RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 CLP1Q92989 425 aaKnown RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 MMTAG2Q9BU76 263 aaKnown RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 ELAC1Q9H777 363 aaKnown RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 DBR1Q9UK59 544 aaKnown RBP10.85□□□□□ -0.67
RNF4-221ENST00000513643 AKT3Q9Y243 479 aa10.85□□□□□ -0.67
RNF4-221ENST00000513643 MUC3AQ02505 3323 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 A0A087WZ62 844 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 C5orf67F2Z3F1 127 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 ASAP2O43150 1006 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 DGAT1O75907 488 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 SYT1P21579 422 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 SARSP49591 514 aaKnown RBP10.84□□□□□ -0.67
RNF4-221ENST00000513643 DNM2P50570 870 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 EMC2Q15006 297 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 HYIQ5T013 277 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 ARL6IP4Q66PJ3 421 aaKnown RBP10.84□□□□□ -0.67
RNF4-221ENST00000513643 SLC24A5Q71RS6 500 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
RNF4-221ENST00000513643 FERMT3Q86UX7 667 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 KSR1Q8IVT5 923 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 SLC7A3Q8WY07 619 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 TMEM143Q96AN5 459 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 NACC1Q96RE7 527 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 TGS1Q96RS0 853 aaKnown RBP10.84□□□□□ -0.67
RNF4-221ENST00000513643 ADAM2Q99965 735 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 FDXACB1Q9BRP7 624 aaPredicted RBP10.84□□□□□ -0.67
RNF4-221ENST00000513643 ZBED2Q9BTP6 218 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 CHST12Q9NRB3 414 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 C1orf112Q9NSG2 853 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 LMCD1Q9NZU5 365 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 GINS2Q9Y248 185 aa10.84□□□□□ -0.67
RNF4-221ENST00000513643 A0A087WWV3 80 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 A0A0U1RQF3 1178 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 H3BQV1 296 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 RFXAPO00287 272 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 FOSL2P15408 326 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 PDCP20941 246 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 HOXA11P31270 313 aaPredicted RBP10.83□□□□□ -0.68
RNF4-221ENST00000513643 LAMTOR4Q0VGL1 99 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 NFX1Q12986 1120 aaKnown RBP10.83□□□□□ -0.68
RNF4-221ENST00000513643 GNL2Q13823 731 aaKnown RBP10.83□□□□□ -0.68
RNF4-221ENST00000513643 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 BRAPQ7Z569 592 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 KCTD17Q8N5Z5 321 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 PIGOQ8TEQ8 1089 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 PSPC1Q8WXF1 523 aaKnown RBP10.83□□□□□ -0.68
RNF4-221ENST00000513643 SAMD11Q96NU1 681 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 PPP1R16BQ96T49 567 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 NFKBIZQ9BYH8 718 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
RNF4-221ENST00000513643 MINDY3Q9H8M7 445 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 RNF19AQ9NV58 838 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 MTMR6Q9Y217 621 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 COL4A3BPQ9Y5P4 624 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 MTCH2Q9Y6C9 303 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 MORC2Q9Y6X9 1032 aaPredicted RBP10.83□□□□□ -0.68
RNF4-221ENST00000513643 LOXHD1Q8IVV2 1947 aa10.83□□□□□ -0.68
RNF4-221ENST00000513643 ZNF623O75123 536 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 CSDE1O75534 798 aaKnown RBP10.82□□□□□ -0.68
RNF4-221ENST00000513643 UPP2O95045 317 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 STAG3L1P0CL83 205 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 ATF7P17544 494 aaPredicted RBP10.82□□□□□ -0.68
RNF4-221ENST00000513643 CYP11B2P19099 503 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 POLGP54098 1239 aaPredicted RBP10.82□□□□□ -0.68
RNF4-221ENST00000513643 PTENP60484 403 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 RESTQ13127 1097 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 GRB10Q13322 594 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 MXD4Q14582 209 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms