RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 PCDHB12Q9Y5F1 795 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 H3BRJ5 948 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ZNF197O14709 1029 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 PSMD3O43242 534 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 YWHAGP61981 247 aaKnown RBP eCLIP4.56□□□□□ -1.68
VCAN-209ENST00000513016 MTX1Q13505 466 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 LAMB3Q13751 1172 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SV2CQ496J9 727 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 KRT39Q6A163 491 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CDC42EP5Q6NZY7 148 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SKAP1Q86WV1 359 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 MYLK4Q86YV6 388 aaPredicted RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 ENGASEQ8NFI3 743 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 UBE2Q2Q8WVN8 375 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SCG3Q8WXD2 468 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 TLR7Q9NYK1 1049 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 ZBTB12Q9Y330 459 aaPredicted RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 ALKQ9UM73 1620 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 PVALEFA0A1B0GWK0 134 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 AP3B1O00203 1094 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 DGAT1O75907 488 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CYP27A1Q02318 531 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ELAVL2Q12926 359 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 C12orf60Q5U649 245 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CEP120Q8N960 986 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SRPK1Q96SB4 655 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 YME1L1Q96TA2 773 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CENPKQ9BS16 269 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 VCX3BQ9H321 246 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SP110Q9HB58 689 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CYP2D7A0A087X1C5 515 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 PLSCR1O15162 318 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ZBED1O96006 694 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ERCC3P19447 782 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 DDIT3P35638 169 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 MNAT1P51948 309 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 NOGQ13253 232 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 EFHC2Q5JST6 749 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ARMC6Q6NXE6 501 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CALN1Q9BXU9 219 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SYNDIG1Q9H7V2 258 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CBX8Q9HC52 389 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 PRMT7Q9NVM4 692 aaPredicted RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 ATP11BQ9Y2G3 1177 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 TRIM17Q9Y577 477 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 STRNO43815 780 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 CABYRO75952 493 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SLC4A1P02730 911 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 GRIK1P39086 918 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 TAP1Q03518 808 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 SCRN1Q12765 414 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 WHAMMP3Q1A5X7 153 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 TMTC4Q5T4D3 741 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 NXNQ6DKJ4 435 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ITPRIPL1Q6GPH6 555 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 JADE1Q6IE81 842 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 UNC13DQ70J99 1090 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 ADGRF4Q8IZF3 695 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 GPC2Q8N158 579 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 PPP1R2P1Q96PQ5 205 aa4.56□□□□□ -1.68
VCAN-209ENST00000513016 NGRNQ9NPE2 291 aaKnown RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 MAGED2Q9UNF1 606 aaPredicted RBP4.56□□□□□ -1.68
VCAN-209ENST00000513016 EBAG9O00559 213 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 IL18RAPO95256 599 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 AMHP03971 560 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 NR3C2P08235 984 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CYP2D6P10635 497 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 AKR1B1P15121 316 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 PNPLA4P41247 253 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 ZNF484Q5JVG2 852 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 ANKS3Q6ZW76 656 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 PROM2Q8N271 834 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 DCUN1D1Q96GG9 259 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 SPON2Q9BUD6 331 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 DRC3Q9H069 523 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 RAB23Q9ULC3 237 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CPS1P31327 1500 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 FAM196BA6NMK8 535 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 TBX3O15119 743 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 TAC1P20366 129 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 OR1G1P47890 313 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 RASSF2P50749 326 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 ZNF75DP51815 510 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 NKX1-1Q15270 411 aaPredicted RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 C8orf34Q49A92 452 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CHADLQ6NUI6 762 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 SAMD7Q7Z3H4 446 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CACNA2D3Q8IZS8 1091 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 BANK1Q8NDB2 785 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 PBXIP1Q96AQ6 731 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 SDCCAG3Q96C92 435 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 TRPC7Q9HCX4 862 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 FAM217BQ9NTX9 383 aaPredicted RBP4.55□□□□□ -1.68
VCAN-209ENST00000513016 GOLGA8IPA6NC78 632 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 GOLGA8JA6NMD2 632 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 FKTNO75072 461 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 URODP06132 367 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 CTSHP09668 335 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 SAT1P21673 171 aa4.55□□□□□ -1.68
VCAN-209ENST00000513016 PSMA2P25787 234 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms