RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 A0A1W2PNR3 127 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 CCDC69A6NI79 296 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 PRC1O43663 620 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 LGALS2P05162 132 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 SMIM10L2AP0DMW4 78 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 SMIM10L2BP0DMW5 78 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 CALM1P0DP23 149 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 CALM2P0DP24 149 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 CALM3P0DP25 149 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 MCM5P33992 734 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 DEFB103AP81534 67 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 MRPS9P82933 396 aaKnown RBP8.25□□□□□ -1.09
USP46-208ENST00000512656 ZNF200P98182 395 aaPredicted RBP8.25□□□□□ -1.09
USP46-208ENST00000512656 GRB10Q13322 594 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 NCOA4Q13772 614 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 PCNX4Q63HM2 1172 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 C1orf229Q6ZS94 237 aaPredicted RBP8.25□□□□□ -1.09
USP46-208ENST00000512656 CYFIP1Q7L576 1253 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 TRIM50Q86XT4 487 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 MB21D2Q8IYB1 491 aaPredicted RBP8.25□□□□□ -1.09
USP46-208ENST00000512656 ZNF654Q8IZM8 581 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 PIBF1Q8WXW3 757 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 SEPT8Q92599 483 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 TMEM87BQ96K49 555 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 LY9Q9HBG7 655 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 SCHIP1Q9P0W5 487 aaPredicted RBP8.25□□□□□ -1.09
USP46-208ENST00000512656 INSL6Q9Y581 213 aa8.25□□□□□ -1.09
USP46-208ENST00000512656 GPC6Q9Y625 555 aaPredicted RBP8.25□□□□□ -1.09
USP46-208ENST00000512656 BAZ2BQ9UIF8 2168 aaKnown RBP8.25□□□□□ -1.09
USP46-208ENST00000512656 TRIP12Q14669 1992 aaPredicted RBP8.24□□□□□ -1.09
USP46-208ENST00000512656 BRWD1Q9NSI6 2320 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 LOC100996750A0A140TA64 210 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 LCHNA4D1U4 455 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 LINC01553A4QN01 128 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 EPOPA6NHQ4 379 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 FAM157BP0CG42 384 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 HOXC8P31273 242 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 ANTXR2P58335 489 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 ERVK-21P61565 698 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 TFF2Q03403 129 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 TNP2Q05952 138 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 MBTPS1Q14703 1052 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 PLA2G4EQ3MJ16 856 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 PLEKHG4Q58EX7 1191 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 ARSJQ5FYB0 599 aaPredicted RBP8.24□□□□□ -1.09
USP46-208ENST00000512656 FAM117BQ6P1L5 589 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 USP17L6PQ6QN14 398 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 SYNE3Q6ZMZ3 975 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 RSPH3Q86UC2 560 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 MYOCDQ8IZQ8 938 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 DBF4BQ8NFT6 615 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 APBB2Q92870 758 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 WNT8BQ93098 351 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 GPRASP2Q96D09 838 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 SAMD11Q96NU1 681 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 GPR20Q99678 358 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 KRTAP4-6Q9BYQ5 205 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 RNPEPQ9H4A4 650 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 PSTPIP2Q9H939 334 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 RTEL1Q9NZ71 1219 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 TAF6LQ9Y6J9 622 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 NRCAMQ92823 1304 aa8.24□□□□□ -1.09
USP46-208ENST00000512656 SPDYE3A6NKU9 549 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 SH2B2O14492 632 aaPredicted RBP8.23□□□□□ -1.09
USP46-208ENST00000512656 MEIS2O14770 477 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 MSTNO14793 375 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 MAFGO15525 162 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 TREHO43280 583 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 LPXNO60711 386 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 RPLP2P05387 115 aaKnown RBP8.23□□□□□ -1.09
USP46-208ENST00000512656 EPXP11678 715 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 LIFRP42702 1097 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 SNRPNP63162 240 aaKnown RBP8.23□□□□□ -1.09
USP46-208ENST00000512656 ARHGAP4P98171 946 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 TEAD4Q15561 434 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 UTP14CQ5TAP6 766 aaKnown RBP8.23□□□□□ -1.09
USP46-208ENST00000512656 KRT40Q6A162 431 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 TMCO2Q7Z6W1 182 aaPredicted RBP8.23□□□□□ -1.09
USP46-208ENST00000512656 TEX2Q8IWB9 1127 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 GDPD5Q8WTR4 605 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 TNPO1Q92973 898 aaKnown RBP8.23□□□□□ -1.09
USP46-208ENST00000512656 POM121Q96HA1 1249 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 YME1L1Q96TA2 773 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 C1QTNF1Q9BXJ1 281 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 SUGCTQ9HAC7 445 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 SETD4Q9NVD3 440 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 ZNF358Q9NW07 568 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 MTUS1Q9ULD2 1270 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 SLC12A7Q9Y666 1083 aa8.23□□□□□ -1.09
USP46-208ENST00000512656 SLC27A2O14975 620 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 PLEKHA8P1O95397 391 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 CTSHP09668 335 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 MAPTP10636 758 aaKnown RBP8.22□□□□□ -1.09
USP46-208ENST00000512656 ATP1A2P50993 1020 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 KCNQ1P51787 676 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 EPHA4P54764 986 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 HTRA4P83105 476 aaPredicted RBP8.22□□□□□ -1.09
USP46-208ENST00000512656 SP4Q02446 784 aa8.22□□□□□ -1.09
USP46-208ENST00000512656 MTMR1Q13613 665 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 233 ms