RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 PIK3R4Q99570 1358 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 hCG_1807616A0A1W2PRN6 198 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 KLHL33A6NCF5 533 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 RHPN2P1A8MT19 583 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 F8W8V4 182 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 KHNYNO15037 678 aaKnown RBP6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 MTSS1O43312 755 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 FOXD2O60548 495 aaPredicted RBP6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 IPO7O95373 1038 aaKnown RBP6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 TLX1P31314 330 aaPredicted RBP6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 GRIA4P48058 902 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 FAPQ12884 760 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 AMOTQ4VCS5 1084 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 RNF220Q5VTB9 566 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 PPP1R42Q7Z4L9 355 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 TAX1BP1Q86VP1 789 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 SCUBE3Q8IX30 993 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZBTB8BQ8NAP8 495 aaPredicted RBP6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 PPP1R14AQ96A00 147 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 SLC9A7Q96T83 725 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 DUSP12Q9UNI6 340 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 PCDHA9Q9Y5H5 950 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 CORINQ9Y5Q5 1042 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 MRFAP1Q9Y605 127 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 ROBO2Q9HCK4 1378 aa6.96□□□□□ -1.29
TRAPPC11-209ENST00000512476 CDC42BPAQ5VT25 1732 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARPC4-TTLL3A0A0A6YYG9 625 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 ARHGAP10A1A4S6 786 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 LGALS16A8MUM7 142 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 CTAGE5O15320 804 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 B3GALT2O43825 422 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 UBXN7O94888 489 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 SGPL1O95470 568 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 CYP2A6P11509 494 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 HOXA10P31260 410 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 GPR3P46089 330 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 CPT1AP50416 773 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 IKBKEQ14164 716 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 STARD3Q14849 445 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 POTEHQ6S545 545 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 RFX8Q6ZV50 586 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 B4GALNT4Q76KP1 1039 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 LPCAT2Q7L5N7 544 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 BHMTQ93088 406 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 TSEN34Q9BSV6 310 aaKnown RBP6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZNF304Q9HCX3 659 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 SAMD15Q9P1V8 674 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 IL16Q14005 1332 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 SETD5Q9C0A6 1442 aa6.96□□□□□ -1.3
TRAPPC11-209ENST00000512476 PI4KAP2A4QPH2 592 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 POM121BA6NF01 834 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 RIPK2O43353 540 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 THAP12O43422 761 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 TSHRP16473 764 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 SEC24CP53992 1094 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 CASP6P55212 293 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 NFE2L1Q14494 772 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 OASLQ15646 514 aaKnown RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 INTS6LQ5JSJ4 861 aaKnown RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 MCTP1Q6DN14 999 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 DARS2Q6PI48 645 aaKnown RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 KIAA0319LQ8IZA0 1049 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZBTB44Q8NCP5 570 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 MNS1Q8NEH6 495 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 CREB3L4Q8TEY5 395 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 SHC3Q92529 594 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 TMEM60Q9H2L4 133 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 RAB3GAP2Q9H2M9 1393 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 AKAP7Q9P0M2 348 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 SUSD2Q9UGT4 822 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 SQORQ9Y6N5 450 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 CAMSAP2Q08AD1 1489 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 KRBA1A5PL33 1030 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 CCDC69A6NI79 296 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 UBAP1LF5GYI3 381 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 RTN3O95197 1032 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 IMPDH2P12268 514 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 MYCLP12524 364 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 RXRBP28702 533 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 CREMQ03060 361 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 GPR139Q6DWJ6 353 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 MTDHQ86UE4 582 aaKnown RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 CMTR1Q8N1G2 835 aaKnown RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 KRT78Q8N1N4 520 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 GRIN3AQ8TCU5 1115 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 TCF12Q99081 682 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 TCHPQ9BT92 498 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 SH2B1Q9NRF2 756 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 FAM184BQ9ULE4 1060 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 KCNH4Q9UQ05 1017 aa6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 DNMT1P26358 1616 aaKnown RBP6.95□□□□□ -1.3
TRAPPC11-209ENST00000512476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 ZNF644Q9H582 1327 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 SLC12A8A0AV02 714 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 AQP12BA6NM10 295 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 PTP4A3O75365 173 aa6.94□□□□□ -1.3
TRAPPC11-209ENST00000512476 SOAT2O75908 522 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms