RNA–Protein interactions for RNA: ENST00000512153.5

COPB2-208, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-208ENST00000512153 HIP1O00291 1037 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 ZC3H11AO75152 810 aaKnown RBP eCLIP12.13□□□□□ -0.47
COPB2-208ENST00000512153 KIF5BP33176 963 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 DSC3Q14574 896 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 UBE2SQ16763 222 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 LETM2Q2VYF4 491 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 ZNF484Q5JVG2 852 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 PDXDC2PQ6P474 469 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
COPB2-208ENST00000512153 ECHDC2Q86YB7 292 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 GPR161Q8N6U8 529 aaKnown RBP12.13□□□□□ -0.47
COPB2-208ENST00000512153 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
COPB2-208ENST00000512153 RSAD2Q8WXG1 361 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 STAMQ92783 540 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 SCLT1Q96NL6 688 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 EMILIN2Q9BXX0 1053 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 CDV3Q9UKY7 258 aaKnown RBP12.13□□□□□ -0.47
COPB2-208ENST00000512153 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 AKT3Q9Y243 479 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
COPB2-208ENST00000512153 CARNS1A5YM72 827 aa12.12□□□□□ -0.47
COPB2-208ENST00000512153 DDX39AO00148 427 aaKnown RBP12.12□□□□□ -0.47
COPB2-208ENST00000512153 POLGP54098 1239 aaPredicted RBP12.12□□□□□ -0.47
COPB2-208ENST00000512153 ATXN1P54253 815 aaKnown RBP12.12□□□□□ -0.47
COPB2-208ENST00000512153 TROAPQ12815 778 aa12.12□□□□□ -0.47
COPB2-208ENST00000512153 VARS2Q5ST30 1063 aaKnown RBP12.12□□□□□ -0.47
COPB2-208ENST00000512153 SLC22A17Q8WUG5 538 aa12.12□□□□□ -0.47
COPB2-208ENST00000512153 ATRIPQ8WXE1 791 aa12.12□□□□□ -0.47
COPB2-208ENST00000512153 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
COPB2-208ENST00000512153 ZBP1Q9H171 429 aa12.12□□□□□ -0.47
COPB2-208ENST00000512153 ZNF302Q9NR11 478 aa12.12□□□□□ -0.47
COPB2-208ENST00000512153 RNF19AQ9NV58 838 aa12.12□□□□□ -0.47
COPB2-208ENST00000512153 COL1A2P08123 1366 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 DCDC2BA2VCK2 349 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
COPB2-208ENST00000512153 CTSAP10619 480 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 SRFP11831 508 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 TMOD1P28289 359 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 ZNF76P36508 570 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 NLRP11P59045 1033 aaKnown RBP12.11□□□□□ -0.47
COPB2-208ENST00000512153 ARHGAP8P85298 464 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 RNASELQ05823 741 aaKnown RBP12.11□□□□□ -0.47
COPB2-208ENST00000512153 PTPN14Q15678 1187 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 CLLU1OSQ5K130 101 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 SWSAP1Q6NVH7 229 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 MIS18BP1Q6P0N0 1132 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 ELMSAN1Q6PJG2 1045 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 DDX53Q86TM3 631 aaKnown RBP12.11□□□□□ -0.47
COPB2-208ENST00000512153 SLC44A3Q8N4M1 653 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 MAP7D2Q96T17 732 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 LZTS2Q9BRK4 669 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 SPZ1Q9BXG8 430 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 SENP2Q9HC62 589 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 TCEAL9Q9UHQ7 104 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 IRAK3Q9Y616 596 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 DNAH14Q0VDD8 3507 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 GPR179Q6PRD1 2367 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 NFASCO94856 1347 aa12.11□□□□□ -0.47
COPB2-208ENST00000512153 A0A0U1RQF3 1178 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 GPR32O75388 356 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 GNAQP50148 359 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 PHLDB3Q6NSJ2 640 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 DCLRE1AQ6PJP8 1040 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 C15orf39Q6ZRI6 1047 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 SUMF1Q8NBK3 374 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 FEZF2Q8TBJ5 459 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 GPR152Q8TDT2 470 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 NXPE3Q969Y0 559 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 IGSF21Q96ID5 467 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 SHDQ96IW2 340 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 ZNF668Q96K58 619 aaPredicted RBP12.1□□□□□ -0.47
COPB2-208ENST00000512153 LNPKQ9C0E8 428 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 GBP3Q9H0R5 595 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 ARHGEF3Q9NR81 526 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 SPATA6Q9NWH7 488 aaPredicted RBP12.1□□□□□ -0.47
COPB2-208ENST00000512153 DACT1Q9NYF0 836 aa12.1□□□□□ -0.47
COPB2-208ENST00000512153 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
COPB2-208ENST00000512153 CCDC195A0A1B0GUA6 201 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 LAMTOR5O43504 91 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 ATG7O95352 703 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 MYBP10242 640 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 EIF4BP23588 611 aaKnown RBP12.09□□□□□ -0.47
COPB2-208ENST00000512153 CLCN3P51790 818 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 LMNB2Q03252 620 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 LONRF3Q496Y0 759 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 EFCAB12Q6NXP0 572 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 BORCS6Q96GS4 357 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 KLHL5Q96PQ7 755 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 PIDD1Q9HB75 910 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 DPP7Q9UHL4 492 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 INPP5FQ9Y2H2 1132 aa12.09□□□□□ -0.47
COPB2-208ENST00000512153 KMT2BQ9UMN6 2715 aaPredicted RBP12.09□□□□□ -0.47
COPB2-208ENST00000512153 MAGEB2O15479 319 aa12.08□□□□□ -0.48
COPB2-208ENST00000512153 C22orf31O95567 290 aa12.08□□□□□ -0.48
COPB2-208ENST00000512153 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
COPB2-208ENST00000512153 CLCN4P51793 760 aa12.08□□□□□ -0.48
COPB2-208ENST00000512153 CSTF1Q05048 431 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms