RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 RDM1Q8NG50 284 aa11.14□□□□□ -0.63
COPS4-211ENST00000511891 CLP1Q92989 425 aaKnown RBP11.14□□□□□ -0.63
COPS4-211ENST00000511891 MAP7D2Q96T17 732 aa11.14□□□□□ -0.63
COPS4-211ENST00000511891 UHRF1Q96T88 793 aaPredicted RBP11.14□□□□□ -0.63
COPS4-211ENST00000511891 ADAMTS10Q9H324 1103 aa11.14□□□□□ -0.63
COPS4-211ENST00000511891 KCNMB3Q9NPA1 279 aa11.14□□□□□ -0.63
COPS4-211ENST00000511891 VAV3Q9UKW4 847 aa11.14□□□□□ -0.63
COPS4-211ENST00000511891 LRFN2Q9ULH4 789 aa11.14□□□□□ -0.63
COPS4-211ENST00000511891 COG5Q9UP83 839 aa11.14□□□□□ -0.63
COPS4-211ENST00000511891 NLRC5Q86WI3 1866 aa11.14□□□□□ -0.63
COPS4-211ENST00000511891 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 C5orf67F2Z3F1 127 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 GPR182O15218 404 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 CSDE1O75534 798 aaKnown RBP11.13□□□□□ -0.63
COPS4-211ENST00000511891 STAG3L1P0CL83 205 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 FGFR4P22455 802 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 TMOD1P28289 359 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 KRT2P35908 639 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 TARBP2Q15633 366 aaKnown RBP11.13□□□□□ -0.63
COPS4-211ENST00000511891 XKR3Q5GH77 459 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 TCEAL5Q5H9L2 206 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 FAM102BQ5T8I3 360 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 PLA2G4FQ68DD2 849 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 PPP4R3AQ6IN85 833 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 CMTR2Q8IYT2 770 aaKnown RBP11.13□□□□□ -0.63
COPS4-211ENST00000511891 WASF1Q92558 559 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 HAS1Q92839 578 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 TNFRSF25Q93038 417 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 SCLT1Q96NL6 688 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 CEP89Q96ST8 783 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 NIFKQ9BYG3 293 aaKnown RBP11.13□□□□□ -0.63
COPS4-211ENST00000511891 UBE2ZQ9H832 354 aaPredicted RBP11.13□□□□□ -0.63
COPS4-211ENST00000511891 ALG13Q9NP73 1137 aaKnown RBP11.13□□□□□ -0.63
COPS4-211ENST00000511891 RGS18Q9NS28 235 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 HCSTQ9UBK5 93 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 PCDHB7Q9Y5E2 793 aa11.13□□□□□ -0.63
COPS4-211ENST00000511891 TTC28Q96AY4 2481 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 TBKBP1A7MCY6 615 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 BTBD18B2RXH4 712 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 C9IYK1 514 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 WNT7AO00755 349 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 RB1P06400 928 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 FGFR1P11362 822 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 GCFC2P16383 781 aaKnown RBP11.12□□□□□ -0.63
COPS4-211ENST00000511891 KCNA5P22460 613 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 GPC3P51654 580 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 PSMC5P62195 406 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 DSC3Q14574 896 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 TIGD5Q53EQ6 642 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 ODR4Q5SWX8 454 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 SLC24A5Q71RS6 500 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 FAM20AQ96MK3 541 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 C11orf84Q9BUA3 381 aaPredicted RBP11.12□□□□□ -0.63
COPS4-211ENST00000511891 C1orf112Q9NSG2 853 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 WRAP73Q9P2S5 460 aaPredicted RBP11.12□□□□□ -0.63
COPS4-211ENST00000511891 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 RWDD3Q9Y3V2 267 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 RALGAPA2Q2PPJ7 1873 aa11.12□□□□□ -0.63
COPS4-211ENST00000511891 MYO7AQ13402 2215 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.11□□□□□ -0.63
COPS4-211ENST00000511891 IGKV6-21A0A0C4DH24 114 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 MARCH6O60337 910 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 ITGB1P05556 798 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 DARSP14868 501 aaKnown RBP11.11□□□□□ -0.63
COPS4-211ENST00000511891 EIF4BP23588 611 aaKnown RBP11.11□□□□□ -0.63
COPS4-211ENST00000511891 NPEPPSP55786 919 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 GUCY1B3Q02153 619 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 CAMK1Q14012 370 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 GSE1Q14687 1217 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 C8orf34Q49A92 452 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 NCAPH2Q6IBW4 605 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 EP400NLQ6ZTU2 488 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 ANO5Q75V66 913 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 CCDC83Q8IWF9 413 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 NLRP7Q8WX94 980 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 NSUN3Q9H649 340 aaKnown RBP11.11□□□□□ -0.63
COPS4-211ENST00000511891 BRMS1Q9HCU9 246 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 RGL1Q9NZL6 768 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 PLAGL2Q9UPG8 496 aa11.11□□□□□ -0.63
COPS4-211ENST00000511891 H3BQ06 376 aaPredicted RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 TBX3O15119 743 aa11.1□□□□□ -0.63
COPS4-211ENST00000511891 EIF5BO60841 1220 aaKnown RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 MAFO75444 373 aaPredicted RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 MMP1P03956 469 aa11.1□□□□□ -0.63
COPS4-211ENST00000511891 DNAJB1P25685 340 aa11.1□□□□□ -0.63
COPS4-211ENST00000511891 GTF2F1P35269 517 aaKnown RBP eCLIP11.1□□□□□ -0.63
COPS4-211ENST00000511891 QARSP47897 775 aaKnown RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 FAM189BP81408 668 aa11.1□□□□□ -0.63
COPS4-211ENST00000511891 CYP4A11Q02928 519 aa11.1□□□□□ -0.63
COPS4-211ENST00000511891 SPIRE1Q08AE8 756 aa11.1□□□□□ -0.63
COPS4-211ENST00000511891 CTTNQ14247 550 aaKnown RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 VARS2Q5ST30 1063 aaKnown RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 SPOUT1Q5T280 376 aaKnown RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 KSR1Q8IVT5 923 aa11.1□□□□□ -0.63
COPS4-211ENST00000511891 DIS3L2Q8IYB7 885 aaKnown RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 KLHL23Q8NBE8 558 aa11.1□□□□□ -0.63
COPS4-211ENST00000511891 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.1□□□□□ -0.63
COPS4-211ENST00000511891 SPPL3Q8TCT6 385 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms