RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
CHFR-208ENST00000511001 RWDD3Q9Y3V2 267 aa13.53□□□□□ -0.24
CHFR-208ENST00000511001 DENND3A2RUS2 1198 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 DDX11L8A8MPP1 907 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 MAFO75444 373 aaPredicted RBP13.52□□□□□ -0.25
CHFR-208ENST00000511001 P4HBP07237 508 aaKnown RBP13.52□□□□□ -0.25
CHFR-208ENST00000511001 DARSP14868 501 aaKnown RBP13.52□□□□□ -0.25
CHFR-208ENST00000511001 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.25
CHFR-208ENST00000511001 QARSP47897 775 aaKnown RBP13.52□□□□□ -0.25
CHFR-208ENST00000511001 NPEPPSP55786 919 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 CAMK1Q14012 370 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 EPHA7Q15375 998 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 PTPROQ16827 1216 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 AAK1Q2M2I8 961 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 TIGD5Q53EQ6 642 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 TCEAL5Q5H9L2 206 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 FAM102BQ5T8I3 360 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 CCDC83Q8IWF9 413 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
CHFR-208ENST00000511001 C11orf84Q9BUA3 381 aaPredicted RBP13.52□□□□□ -0.25
CHFR-208ENST00000511001 PLVAPQ9BX97 442 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 LMAN2LQ9H0V9 348 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 UBE2ZQ9H832 354 aaPredicted RBP13.52□□□□□ -0.25
CHFR-208ENST00000511001 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 LRFN2Q9ULH4 789 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 PCDHB7Q9Y5E2 793 aa13.52□□□□□ -0.25
CHFR-208ENST00000511001 CSDE1O75534 798 aaKnown RBP13.51□□□□□ -0.25
CHFR-208ENST00000511001 FGFR4P22455 802 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 COL19A1Q14993 1142 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 NCAPH2Q6IBW4 605 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 C4orf19Q8IY42 314 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 P2RX5Q93086 422 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 DYDC2Q96IM9 177 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
CHFR-208ENST00000511001 CYP26B1Q9NR63 512 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 TMEM161AQ9NX61 479 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 RGL1Q9NZL6 768 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 HCSTQ9UBK5 93 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
CHFR-208ENST00000511001 A0A087WZ62 844 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 BAG4O95429 457 aaKnown RBP13.5□□□□□ -0.25
CHFR-208ENST00000511001 ITGB1P05556 798 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 DNAJB1P25685 340 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
CHFR-208ENST00000511001 GUCY1B3Q02153 619 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 SLFN12Q8IYM2 578 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 SPPL3Q8TCT6 385 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 FDXACB1Q9BRP7 624 aaPredicted RBP13.5□□□□□ -0.25
CHFR-208ENST00000511001 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
CHFR-208ENST00000511001 LXNQ9BS40 222 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
CHFR-208ENST00000511001 NSUN3Q9H649 340 aaKnown RBP13.5□□□□□ -0.25
CHFR-208ENST00000511001 DHX33Q9H6R0 707 aaKnown RBP13.5□□□□□ -0.25
CHFR-208ENST00000511001 ALG13Q9NP73 1137 aaKnown RBP13.5□□□□□ -0.25
CHFR-208ENST00000511001 TBKBP1A7MCY6 615 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 ZBTB39O15060 712 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 MARCH6O60337 910 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 DKC1O60832 514 aaKnown RBP eCLIP13.49□□□□□ -0.25
CHFR-208ENST00000511001 SLITRK3O94933 977 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 FGFR1P11362 822 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
CHFR-208ENST00000511001 TRIM29Q14134 588 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 CTTNQ14247 550 aaKnown RBP13.49□□□□□ -0.25
CHFR-208ENST00000511001 CALCRLQ16602 461 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 NAALADL2Q58DX5 795 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 ZNF598Q86UK7 904 aaKnown RBP13.49□□□□□ -0.25
CHFR-208ENST00000511001 ECHDC2Q86YB7 292 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 KSR1Q8IVT5 923 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 KLHL23Q8NBE8 558 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.49□□□□□ -0.25
CHFR-208ENST00000511001 NLRP7Q8WX94 980 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 CEP170P1Q96L14 293 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
CHFR-208ENST00000511001 CASD1Q96PB1 797 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 GCOM2Q9BZD3 368 aaPredicted RBP13.49□□□□□ -0.25
CHFR-208ENST00000511001 CWH43Q9H720 699 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
CHFR-208ENST00000511001 SUCLA2Q9P2R7 463 aaPredicted RBP13.49□□□□□ -0.25
CHFR-208ENST00000511001 ZSCAN20P17040 1043 aaPredicted RBP13.48□□□□□ -0.25
CHFR-208ENST00000511001 KCNA5P22460 613 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 YWHABP31946 246 aaKnown RBP13.48□□□□□ -0.25
CHFR-208ENST00000511001 CDC42EP1Q00587 391 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 CYP4A11Q02928 519 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 HYAL1Q12794 435 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 LEXMQ3ZCV2 418 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 LRRC55Q6ZSA7 311 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 ZNF410Q86VK4 478 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 RHPN2Q8IUC4 686 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 NEK9Q8TD19 979 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 PABPC5Q96DU9 382 aaKnown RBP13.48□□□□□ -0.25
CHFR-208ENST00000511001 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 SCLT1Q96NL6 688 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 HSD17B14Q9BPX1 270 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 EIF2AK1Q9BQI3 630 aaKnown RBP13.48□□□□□ -0.25
CHFR-208ENST00000511001 JPH2Q9BR39 696 aaPredicted RBP13.48□□□□□ -0.25
CHFR-208ENST00000511001 C1QTNF1Q9BXJ1 281 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 TMEM117Q9H0C3 514 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 ZSWIM4Q9H7M6 989 aa13.48□□□□□ -0.25
CHFR-208ENST00000511001 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms