RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 FOSP01100 380 aaPredicted RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 ACTN1P12814 892 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 SCG2P13521 617 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 MYOGP15173 224 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 FOSL2P15408 326 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 ATP2A2P16615 1042 aaKnown RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 PDIA3P30101 505 aaKnown RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 HOXC8P31273 242 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 TCF7P36402 384 aaPredicted RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 CCT2P78371 535 aaKnown RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 TOB2Q14106 344 aaPredicted RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 MBTPS1Q14703 1052 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 RAB30Q15771 203 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 NTRK3Q16288 839 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 PKN1Q16512 942 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 TCTN1Q2MV58 587 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 COX20Q5RI15 118 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 ZNF618Q5T7W0 954 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 JAKMIP3Q5VZ66 844 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 RUFY3Q7L099 469 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 SERINC5Q86VE9 423 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 GIMAP8Q8ND71 665 aaPredicted RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 CDHR1Q96JP9 859 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 UPF3BQ9BZI7 483 aaKnown RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 RNPEPQ9H4A4 650 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 NCOA5Q9HCD5 579 aaKnown RBP9.81□□□□□ -0.84
PDPN-209ENST00000510906 SETD4Q9NVD3 440 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 MSRAQ9UJ68 235 aa9.81□□□□□ -0.84
PDPN-209ENST00000510906 GSTTP1A0A1W2PQM5 241 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 PRPF3O43395 683 aaKnown RBP9.8□□□□□ -0.84
PDPN-209ENST00000510906 FAM13AO94988 1023 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 CXCL10P02778 98 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 ARP10275 920 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 GPC1P35052 558 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 SREBF1P36956 1147 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 EVCP57679 992 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 RELBQ01201 579 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 AP3B2Q13367 1082 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 NPAS4Q8IUM7 802 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 TEX2Q8IWB9 1127 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 MAFAQ8NHW3 353 aaPredicted RBP9.8□□□□□ -0.84
PDPN-209ENST00000510906 SEPT1Q8WYJ6 367 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 HPS1Q92902 700 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 ATP6V0A1Q93050 837 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 MXRA8Q9BRK3 442 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 PRDM12Q9H4Q4 367 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 KCNH7Q9NS40 1196 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 DCTN4Q9UJW0 460 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 ZNF215Q9UL58 517 aaPredicted RBP9.8□□□□□ -0.84
PDPN-209ENST00000510906 CYP46A1Q9Y6A2 500 aa9.8□□□□□ -0.84
PDPN-209ENST00000510906 ESYT2A0FGR8 921 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 SERTM1A2A2V5 107 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 MEN1O00255 615 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 MAFGO15525 162 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 PARNO95453 639 aaKnown RBP9.79□□□□□ -0.84
PDPN-209ENST00000510906 CTSHP09668 335 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 IFNAR1P17181 557 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 MARK3P27448 753 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 THPOP40225 353 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 ITGB3BPQ13352 177 aaPredicted RBP9.79□□□□□ -0.84
PDPN-209ENST00000510906 CEP55Q53EZ4 464 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 ERICH6BQ5W0A0 696 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 CNKSR3Q6P9H4 555 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 TMCO2Q7Z6W1 182 aaPredicted RBP9.79□□□□□ -0.84
PDPN-209ENST00000510906 RASGRP4Q8TDF6 673 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 LMBR1Q8WVP7 490 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 SLC9A7Q96T83 725 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 PCYT2Q99447 389 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 SLC26A6Q9BXS9 759 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 OSBPL7Q9BZF2 842 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 TM6SF1Q9BZW5 370 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 ZMYND12Q9H0C1 365 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 GLT8D2Q9H1C3 349 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 ZNF395Q9H8N7 513 aaPredicted RBP9.79□□□□□ -0.84
PDPN-209ENST00000510906 SLC28A3Q9HAS3 691 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 AGO4Q9HCK5 861 aaKnown RBP9.79□□□□□ -0.84
PDPN-209ENST00000510906 JPH1Q9HDC5 661 aaPredicted RBP9.79□□□□□ -0.84
PDPN-209ENST00000510906 LRFN2Q9ULH4 789 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 PCDHA11Q9Y5I1 949 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 CDH23Q9H251 3354 aa9.79□□□□□ -0.84
PDPN-209ENST00000510906 SCN5AQ14524 2016 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 RSPH10B2B2RC85 870 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 FAM86B1E9PN63 330 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 MEIS1O00470 390 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 ARHGEF15O94989 841 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 CA3P07451 260 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 FAM86B2P0C5J1 330 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 RSPH10BP0C881 870 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 MPSTP25325 297 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 NOS2P35228 1153 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 ZNF76P36508 570 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 KCNJ6P48051 423 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 RBM25P49756 843 aaKnown RBP9.78□□□□□ -0.84
PDPN-209ENST00000510906 WDR5P61964 334 aaKnown RBP9.78□□□□□ -0.84
PDPN-209ENST00000510906 ADAM17P78536 824 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 DEFB103AP81534 67 aa9.78□□□□□ -0.84
PDPN-209ENST00000510906 AKAP17AQ02040 695 aaKnown RBP9.78□□□□□ -0.84
PDPN-209ENST00000510906 PPFIA1Q13136 1202 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms