RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 THOC5Q13769 683 aaKnown RBP8.92□□□□□ -0.98
HTT-208ENST00000510626 POLA2Q14181 598 aa8.92□□□□□ -0.98
HTT-208ENST00000510626 PRLRP16471 622 aa8.92□□□□□ -0.98
HTT-208ENST00000510626 HIC1Q14526 733 aa8.92□□□□□ -0.98
HTT-208ENST00000510626 TRIM67Q6ZTA4 783 aa8.92□□□□□ -0.98
HTT-208ENST00000510626 SPATA21Q7Z572 469 aa8.92□□□□□ -0.98
HTT-208ENST00000510626 PASD1Q8IV76 773 aa8.92□□□□□ -0.98
HTT-208ENST00000510626 TMEM51Q9NW97 253 aa8.92□□□□□ -0.98
HTT-208ENST00000510626 PLD3Q8IV08 490 aa8.92□□□□□ -0.98
HTT-208ENST00000510626 NFATC2IPQ8NCF5 419 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 NRBP2Q9NSY0 501 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 LRCH1Q9Y2L9 728 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 KLRF2D3W0D1 207 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 KIAA0391O15091 583 aaKnown RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 LSM1O15116 133 aaKnown RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 E2F6O75461 281 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 NCF2P19878 526 aaPredicted RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 PTH1RQ03431 593 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 TFDP2Q14188 446 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 OTUB1Q96FW1 271 aaPredicted RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 PAPOLBQ9NRJ5 636 aaKnown RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 MXI1P50539 228 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 KLHL41O60662 606 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ARMCX5Q6P1M9 558 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 IFNL3Q8IZI9 196 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 TIMMDC1Q9NPL8 285 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 CAPN9O14815 690 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 PGM1P36871 562 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 CNGA2Q16280 664 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 KYAT1Q16773 422 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 FAM102BQ5T8I3 360 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 TUBGCP3Q96CW5 907 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ANKRD36BP1Q96IX9 119 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 H3BRJ5 948 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 NAALADL2Q58DX5 795 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 TRIM59Q8IWR1 403 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ZMYND8Q9ULU4 1186 aaPredicted RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 TMEM191BP0C7N4 346 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ODR4Q5SWX8 454 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 SH3GL2Q99962 352 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ASNSD1Q9NWL6 643 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 KIF17Q9P2E2 1029 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 MBD2Q9UBB5 411 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ENOPH1Q9UHY7 261 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 NUP153P49790 1475 aaKnown RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 FOXO3O43524 673 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 KRT1P04264 644 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 DDHD1Q8NEL9 900 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 RFFLQ8WZ73 363 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ANLNQ9NQW6 1124 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ATAD3AQ9NVI7 634 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ZNF229Q9UJW7 825 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ITIH2P19823 946 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 PAPOLAP51003 745 aaKnown RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 TMC4Q7Z404 712 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ABCA8O94911 1581 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ATP7BP35670 1465 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 RAPGEF3O95398 923 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 TECP42680 631 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 GPC5P78333 572 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 TCIRG1Q13488 830 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 SPOPLQ6IQ16 392 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 ZMYND10O75800 440 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 CTDSPL2Q05D32 466 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 FAM133AQ8N9E0 248 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 RMDN1Q96DB5 314 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 EIF4A1P60842 406 aaKnown RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 JADE3Q92613 823 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 SUCLA2Q9P2R7 463 aaPredicted RBP8.91□□□□□ -0.98
HTT-208ENST00000510626 IP6K2Q9UHH9 426 aa8.91□□□□□ -0.98
HTT-208ENST00000510626 FAM47DPA6NHR8 397 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 SAC3D1A6NKF1 404 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 STX3Q13277 289 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 CEP95Q96GE4 821 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 OLFM1Q99784 485 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 ABCB11O95342 1321 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 SERPINB9P50453 376 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 KDM7AQ6ZMT4 941 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 MMGT1Q8N4V1 131 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 TRPC4APQ8TEL6 797 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 PCSK2P16519 638 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 EFTUD2Q15029 972 aaKnown RBP eCLIP8.9□□□□□ -0.982e-6■■■■□ 23
HTT-208ENST00000510626 PCYOX1LQ8NBM8 494 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 NAF1Q96HR8 494 aaKnown RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 FRMD8P1Q9BZ68 369 aaPredicted RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 SLC16A3O15427 465 aaKnown RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 AP3B2Q13367 1082 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 MTHFD1LQ6UB35 978 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 TTC8Q8TAM2 541 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 KRT35Q92764 455 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 PCCAP05165 728 aaPredicted RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 FCGR1AP12314 374 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 POLR2EP19388 210 aaKnown RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 SNRPFP62306 86 aaKnown RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 CAPRIN1Q14444 709 aaKnown RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 EFL1Q7Z2Z2 1120 aaKnown RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 ZBTB38Q8NAP3 1195 aaPredicted RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 DCLRE1BQ9H816 532 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 CDY2AQ9Y6F7 541 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms