RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 PRR16Q569H4 304 aa20.83■□□□□ 0.93
LIN54-209ENST00000510557 LRRC4BQ9NT99 713 aa20.83■□□□□ 0.93
LIN54-209ENST00000510557 TYW1Q9NV66 732 aaKnown RBP20.83■□□□□ 0.93
LIN54-209ENST00000510557 KIF13BQ9NQT8 1826 aa20.83■□□□□ 0.93
LIN54-209ENST00000510557 SPDYE3A6NKU9 549 aa20.83■□□□□ 0.92
LIN54-209ENST00000510557 EEF2P13639 858 aaKnown RBP20.83■□□□□ 0.92
LIN54-209ENST00000510557 CUL1Q13616 776 aa20.83■□□□□ 0.92
LIN54-209ENST00000510557 SLMAPQ14BN4 828 aa20.83■□□□□ 0.92
LIN54-209ENST00000510557 TRADDQ15628 312 aa20.83■□□□□ 0.92
LIN54-209ENST00000510557 APOBEC3HQ6NTF7 200 aaKnown RBP20.83■□□□□ 0.92
LIN54-209ENST00000510557 OR2W6PQ8NHA6 318 aa20.83■□□□□ 0.92
LIN54-209ENST00000510557 SH3GL3Q99963 347 aa20.83■□□□□ 0.92
LIN54-209ENST00000510557 TMEM59LQ9UK28 342 aa20.83■□□□□ 0.92
LIN54-209ENST00000510557 C15orf41Q9Y2V0 281 aa20.83■□□□□ 0.92
LIN54-209ENST00000510557 KLHL33A6NCF5 533 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 G3V3G9 751 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 BACH1O14867 736 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 RAD21O60216 631 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 DRD4P21917 467 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 PON1P27169 355 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 PPARDQ03181 441 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 RIPK1Q13546 671 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 ENOX2Q16206 610 aaKnown RBP20.82■□□□□ 0.92
LIN54-209ENST00000510557 DCAF8Q5TAQ9 597 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 ACTRT1Q8TDG2 376 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 CALR3Q96L12 384 aaKnown RBP20.82■□□□□ 0.92
LIN54-209ENST00000510557 REEP2Q9BRK0 252 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 PACSIN1Q9BY11 444 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 INTUQ9ULD6 942 aa20.82■□□□□ 0.92
LIN54-209ENST00000510557 CCT8L1PA6NM43 557 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 TRIM37O94972 964 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 GSTA1P08263 222 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 MYBP10242 640 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 SCNN1DP51172 638 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 CERKLQ49MI3 558 aaPredicted RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 ZNF571Q7Z3V5 609 aaPredicted RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 SFR1Q86XK3 245 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 CCDC63Q8NA47 563 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 TMX4Q9H1E5 349 aaPredicted RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 PI4KBQ9UBF8 816 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 CNOT8Q9UFF9 292 aaKnown RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 NAGPAQ9UK23 515 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 UBR3Q6ZT12 1888 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 GTPBP10A4D1E9 387 aaKnown RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 KCNK3O14649 394 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 TBCAO75347 108 aaKnown RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 KIF4AO95239 1232 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 SPATA31C1P0DKV0 1188 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 GAP43P17677 238 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 SLC9A1P19634 815 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 DNA2P51530 1060 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 PABPC4Q13310 644 aaKnown RBP eCLIP20.81■□□□□ 0.92
LIN54-209ENST00000510557 MTMR3Q13615 1198 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 UAP1Q16222 522 aaPredicted RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 CDCA2Q69YH5 1023 aaPredicted RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 ALKBH5Q6P6C2 394 aaKnown RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 SYCE1Q8N0S2 351 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 CCDC197Q8NCU1 140 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 THOC1Q96FV9 657 aaKnown RBP20.81■□□□□ 0.92
LIN54-209ENST00000510557 MRIQ9BWK5 157 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 TRPC6Q9Y210 931 aa20.81■□□□□ 0.92
LIN54-209ENST00000510557 A0A0A6YYK5 440 aaPredicted RBP20.8■□□□□ 0.92
LIN54-209ENST00000510557 PHF20L1A8MW92 1017 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 POLRMTO00411 1230 aaKnown RBP20.8■□□□□ 0.92
LIN54-209ENST00000510557 SREBF1P36956 1147 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 CASP5P51878 434 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 AP1ARQ63HQ0 302 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 DPY19L2P1Q6NXN4 242 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 FBXO11Q86XK2 927 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 POLR3CQ9BUI4 534 aaPredicted RBP20.8■□□□□ 0.92
LIN54-209ENST00000510557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.8■□□□□ 0.927e-7■■■□□ 16.3
LIN54-209ENST00000510557 NOVA2Q9UNW9 492 aaKnown RBP20.8■□□□□ 0.92
LIN54-209ENST00000510557 GFPT2O94808 682 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 NR3C1P04150 777 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 ACTN1P12814 892 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 CIITAP33076 1130 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 INHBEP58166 350 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 EPHA7Q15375 998 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 BZW1Q7L1Q6 419 aaKnown RBP20.8■□□□□ 0.92
LIN54-209ENST00000510557 ANKS4BQ8N8V4 417 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 KIF9Q9HAQ2 790 aa20.8■□□□□ 0.92
LIN54-209ENST00000510557 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
LIN54-209ENST00000510557 PSMC6P62333 389 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 ERVK-9P63128 1117 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 SLC27A3Q5K4L6 730 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 KLHL7Q8IXQ5 586 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 CHMP6Q96FZ7 201 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 ZDHHC15Q96MV8 337 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 UIMC1Q96RL1 719 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 CNOT10Q9H9A5 744 aaKnown RBP20.79■□□□□ 0.92
LIN54-209ENST00000510557 PACSIN2Q9UNF0 486 aaPredicted RBP20.79■□□□□ 0.92
LIN54-209ENST00000510557 CCDC188H7C350 402 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 ANP32DO95626 131 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 FERP16591 822 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 CRKP46108 304 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 NPEPPSP55786 919 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 DCAF17Q5H9S7 520 aaPredicted RBP20.79■□□□□ 0.92
LIN54-209ENST00000510557 GMCL1P1Q8NEA9 526 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 SCFD2Q8WU76 684 aa20.79■□□□□ 0.92
LIN54-209ENST00000510557 TCP11Q8WWU5 503 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms