RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 GRAPQ13588 217 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 ACAD11Q709F0 780 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 OR6B3Q8NGW1 331 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
NEK1-206ENST00000510533 PDLIM2Q96JY6 352 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 CEP19Q96LK0 163 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 NLRP4Q96MN2 994 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
NEK1-206ENST00000510533 MRFAP1Q9Y605 127 aa11.32□□□□□ -0.6
NEK1-206ENST00000510533 ESYT3A0FGR9 886 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 E9PMD0 336 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 ANXA13P27216 316 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 C1orf146Q5VVC0 180 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 SUSD4Q5VX71 490 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 ZNF564Q8TBZ8 553 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 LRRC37BQ96QE4 947 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 PPP1R16BQ96T49 567 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 ZBTB18Q99592 522 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 ASNSD1Q9NWL6 643 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 USP17L5A8MUK1 530 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 ZNF394Q53GI3 561 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 MB21D2Q8IYB1 491 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 CDC26Q8NHZ8 85 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 DDX47Q9H0S4 455 aaKnown RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 ERBB3P21860 1342 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 TTC26A0AVF1 554 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 BRAFP15056 766 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 PPARGP37231 505 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 ORC2Q13416 577 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 THNSL1Q8IYQ7 743 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 SH3RF3Q8TEJ3 882 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 ATP6V0A4Q9HBG4 840 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 KLHL8Q9P2G9 620 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 HDAC6Q9UBN7 1215 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 TEX33O43247 280 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 ARPP19P56211 112 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 MCPH1Q8NEM0 835 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 MTA3Q9BTC8 594 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 KIFC3Q9BVG8 833 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 NUP85Q9BW27 656 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 SMYD3Q9H7B4 428 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 LRFN2Q9ULH4 789 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 INPP5FQ9Y2H2 1132 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 RFX7Q2KHR2 1363 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 GOLGA8MH3BSY2 632 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 CYP2D6P10635 497 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 MCF2P10911 925 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 RWDD4Q6NW29 188 aaKnown RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 PASD1Q8IV76 773 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 DYDC2Q96IM9 177 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 TGS1Q96RS0 853 aaKnown RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 C11orf70Q9BRQ4 267 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 YY1AP1Q9H869 796 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 MLXIPLQ9NP71 852 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 CAPN11Q9UMQ6 739 aa11.31□□□□□ -0.6
NEK1-206ENST00000510533 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
NEK1-206ENST00000510533 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 COPS2P61201 443 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 TMEM259Q4ZIN3 620 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 ZBTB41Q5SVQ8 909 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 DSTYKQ6XUX3 929 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 MIGA2Q7L4E1 593 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 NOP9Q86U38 636 aaKnown RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 SCG3Q8WXD2 468 aaKnown RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 SLITRK6Q9H5Y7 841 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 MRPL40Q9NQ50 206 aaKnown RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 CHGBP05060 677 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 TMED8Q6PL24 325 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 TMEM270Q6UE05 265 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 SAAL1Q96ER3 474 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 COA1Q9GZY4 146 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 VPS11Q9H270 941 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 TTC7AQ9ULT0 858 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 F8W8V4 182 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 ARFIP2P53365 341 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 NOP14P78316 857 aaKnown RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 EPHA10Q5JZY3 1008 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 CEP70Q8NHQ1 597 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 FAM20AQ96MK3 541 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 EPC1Q9H2F5 836 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms