RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 Q6ZNB5 142 aa6□□□□□ -1.45
NEK1-204ENST00000509912 SAPCD2Q86UD0 394 aa6□□□□□ -1.45
NEK1-204ENST00000509912 CPNE8Q86YQ8 564 aa6□□□□□ -1.45
NEK1-204ENST00000509912 SHISA5Q8N114 240 aa6□□□□□ -1.45
NEK1-204ENST00000509912 KREMEN2Q8NCW0 462 aa6□□□□□ -1.45
NEK1-204ENST00000509912 FRS2Q8WU20 508 aa6□□□□□ -1.45
NEK1-204ENST00000509912 VWCEQ96DN2 955 aa6□□□□□ -1.45
NEK1-204ENST00000509912 SYNPO2Q9UMS6 1093 aa6□□□□□ -1.45
NEK1-204ENST00000509912 ADAMTS8Q9UP79 889 aa6□□□□□ -1.45
NEK1-204ENST00000509912 PCDHA2Q9Y5H9 948 aa6□□□□□ -1.45
NEK1-204ENST00000509912 CASP8AP2Q9UKL3 1982 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 MANSC4A6NHS7 340 aaPredicted RBP5.99□□□□□ -1.45
NEK1-204ENST00000509912 ASLP04424 464 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 GLB1P16278 677 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 GRB10Q13322 594 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 GCKRQ14397 625 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 SART3Q15020 963 aaKnown RBP5.99□□□□□ -1.45
NEK1-204ENST00000509912 ATP13A4Q4VNC1 1196 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 DACT2Q5SW24 774 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 SLC35F1Q5T1Q4 408 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 BEND3Q5T5X7 828 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 CATIPQ7Z7H3 387 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 TDRD7Q8NHU6 1098 aaKnown RBP5.99□□□□□ -1.45
NEK1-204ENST00000509912 Q96M66 194 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 THUMPD2Q9BTF0 503 aaKnown RBP5.99□□□□□ -1.45
NEK1-204ENST00000509912 GLIS2Q9BZE0 524 aaPredicted RBP5.99□□□□□ -1.45
NEK1-204ENST00000509912 PPCSQ9HAB8 311 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 NXF1Q9UBU9 619 aaKnown RBP5.99□□□□□ -1.45
NEK1-204ENST00000509912 SCN9AQ15858 1988 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 A0A1W2PPC1 479 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 FOXO4P98177 505 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 DSG1Q02413 1049 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 SREBF2Q12772 1141 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 RNF219Q5W0B1 726 aaPredicted RBP5.99□□□□□ -1.45
NEK1-204ENST00000509912 POMZP3Q6PJE2 187 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 SLC51AQ86UW1 340 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.99□□□□□ -1.45
NEK1-204ENST00000509912 CHMP4CQ96CF2 233 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 GCC1Q96CN9 775 aa5.99□□□□□ -1.45
NEK1-204ENST00000509912 A0A0A0MRY4 1105 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 PLS3P13797 630 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 EIF2S2P20042 333 aaKnown RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 MAP2K3P46734 347 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 ZNF267Q14586 743 aaPredicted RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 GRM3Q14832 879 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 ANKRD18AQ8IVF6 992 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 WNT8BQ93098 351 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 KIFC2Q96AC6 838 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 CHAMP1Q96JM3 812 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 ATXN3LQ9H3M9 355 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 PTPRHQ9HD43 1115 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 MYPNQ86TC9 1320 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 POLR2AP24928 1970 aaKnown RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 OTOFQ9HC10 1997 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 CCDC163A0A0D9SF12 145 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 RAD17O75943 681 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 ATP2A2P16615 1042 aaKnown RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 SLC9A1P19634 815 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 FGFR2P21802 821 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 PLA2G4EQ3MJ16 856 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 SCARA3Q6AZY7 606 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 RGMBQ6NW40 437 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 TSHZ1Q6ZSZ6 1077 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 RBM12BQ8IXT5 1001 aaKnown RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 FMR1NBQ8N0W7 255 aaPredicted RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 MAGEB6Q8N7X4 407 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 SLC39A13Q96H72 371 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 MCOLN1Q9GZU1 580 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 SAP30BPQ9UHR5 308 aaKnown RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 TRMT112Q9UI30 125 aaKnown RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 CNOT7Q9UIV1 285 aaKnown RBP5.98□□□□□ -1.45
NEK1-204ENST00000509912 HDAC9Q9UKV0 1011 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 U3KQE9 123 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 A0A0G2JMZ2 1700 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 PHIPQ8WWQ0 1821 aa5.98□□□□□ -1.45
NEK1-204ENST00000509912 CCDC189A1A4V9 331 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 IGKV5-2P06315 115 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 HOXB4P17483 251 aaPredicted RBP5.97□□□□□ -1.45
NEK1-204ENST00000509912 KRT15P19012 456 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 INF2Q27J81 1249 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 CPZQ66K79 652 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 TOP6BLQ8N6T0 577 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 JAM3Q9BX67 310 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 STK31Q9BXU1 1019 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 RNF208Q9H0X6 261 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 CYP4F12Q9HCS2 524 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 GDF2Q9UK05 429 aaPredicted RBP5.97□□□□□ -1.45
NEK1-204ENST00000509912 CEP131Q9UPN4 1083 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 ATRNL1Q5VV63 1379 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 PTPDC1A2A3K4 754 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 YDJCA8MPS7 323 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 ABLIM3O94929 683 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 OSMP13725 252 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 CCND1P24385 295 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 TRAPPC10P48553 1259 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 CCT4P50991 539 aaKnown RBP5.97□□□□□ -1.45
NEK1-204ENST00000509912 GPSM2P81274 684 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 PROSER3Q2NL68 480 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 FAM102BQ5T8I3 360 aa5.97□□□□□ -1.45
NEK1-204ENST00000509912 PASD1Q8IV76 773 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms