RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NASPP49321 788 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 FXR2P51116 673 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 CRYBB1P53674 252 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 NLRP11P59045 1033 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 ERVK-21P61565 698 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 PSMC5P62195 406 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 HTRA4P83105 476 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 CYP4A11Q02928 519 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 DNM1Q05193 864 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 BTG3Q14201 252 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 CTTNQ14247 550 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 RILPL1Q5EBL4 403 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 PLA2G4FQ68DD2 849 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 KCNK18Q7Z418 384 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 SLFN12Q8IYM2 578 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 NLRP7Q8WX94 980 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 ZNF668Q96K58 619 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 SAMD11Q96NU1 681 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 CLIC6Q96NY7 704 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 PNMA5Q96PV4 448 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 HSD17B14Q9BPX1 270 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 EIF2AK1Q9BQI3 630 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 C17orf80Q9BSJ5 609 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 CDHR5Q9HBB8 845 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 ST3GAL5Q9UNP4 418 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 NOC2LQ9Y3T9 749 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 MTCH2Q9Y6C9 303 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 PRUNE2Q8WUY3 3088 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 KDM3AQ9Y4C1 1321 aa9.78□□□□□ -0.84
PDLIM5-213ENST00000509357 A0A087X0B3 334 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 P4HBP07237 508 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 MARCKSP29966 332 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 CTNNB1P35222 781 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 QARSP47897 775 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 ORC2Q13416 577 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 MKRN4PQ13434 485 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 DRP2Q13474 957 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 TARBP2Q15633 366 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 PTPROQ16827 1216 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 SPECC1Q5M775 1068 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 ANO5Q75V66 913 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 NPAS4Q8IUM7 802 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 TMEM192Q8IY95 271 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 LINC01465Q8N7H1 131 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 LINC00301Q8NCQ3 95 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 CCDC43Q96MW1 224 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 ADAM2Q99965 735 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 THEGQ9P2T0 379 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 DAXXQ9UER7 740 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 NOL7Q9UMY1 257 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 PCDHA12Q9UN75 941 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 PCDHB7Q9Y5E2 793 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 CHD7Q9P2D1 2997 aa9.77□□□□□ -0.85
PDLIM5-213ENST00000509357 VWA3AA6NCI4 1184 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 GPR32O75388 356 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 HSP90AA1P07900 732 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 ZSCAN20P17040 1043 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 POU3F3P20264 500 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 PRPHP41219 470 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 NPEPPSP55786 919 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 MRPS5P82675 430 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 CDC42EP1Q00587 391 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 GPM6BQ13491 265 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 BECN1Q14457 450 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 EPHA7Q15375 998 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 PAN2Q504Q3 1202 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 EPC2Q52LR7 807 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 AXDND1Q5T1B0 1012 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 SPOUT1Q5T280 376 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 OTUD6AQ7L8S5 288 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 RTN4RL1Q86UN2 441 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 CATSPER3Q86XQ3 398 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 TPH2Q8IWU9 490 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 ZNF710Q8N1W2 664 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 TMEM40Q8WWA1 233 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 ATXN2LQ8WWM7 1075 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 SLC7A3Q8WY07 619 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 CEP170P1Q96L14 293 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 JPH2Q9BR39 696 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 LXNQ9BS40 222 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 NIFKQ9BYG3 293 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 TMX1Q9H3N1 280 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 ZSCAN16Q9H4T2 348 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 GDPD2Q9HCC8 539 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 ERVK-5Q9HDB9 667 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 C1orf112Q9NSG2 853 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 LMCD1Q9NZU5 365 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 SUCLA2Q9P2R7 463 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 RWDD3Q9Y3V2 267 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 ADGRA3Q8IWK6 1321 aa9.76□□□□□ -0.85
PDLIM5-213ENST00000509357 GBF1Q92538 1859 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 DGKIO75912 1065 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 CSPG5O95196 566 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 EIF4BP23588 611 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 SARSP49591 514 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms