RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ZNF713Q8N859 430 aaPredicted RBP18.14■□□□□ 0.49
CXCL1-202ENST00000509101 ZNF668Q96K58 619 aaPredicted RBP18.14■□□□□ 0.49
CXCL1-202ENST00000509101 MAP7D2Q96T17 732 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 ZNF577Q9BSK1 485 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 SMOC2Q9H3U7 446 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 TCEAL9Q9UHQ7 104 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 V9GY48 417 aaPredicted RBP18.14■□□□□ 0.49
CXCL1-202ENST00000509101 VPS13AQ96RL7 3174 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 C2orf71A6NGG8 1288 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 WEE2P0C1S8 567 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 ZSCAN20P17040 1043 aaPredicted RBP18.13■□□□□ 0.49
CXCL1-202ENST00000509101 NUBP1P53384 320 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 NECTIN1Q15223 517 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 ZNF746Q6NUN9 644 aaPredicted RBP18.13■□□□□ 0.49
CXCL1-202ENST00000509101 UBALD2Q8IYN6 164 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 SLC39A11Q8N1S5 342 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 LRRC71Q8N4P6 559 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 NECTIN4Q96NY8 510 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 GLT8D2Q9H1C3 349 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 GABBR1Q9UBS5 961 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 CEP131Q9UPN4 1083 aa18.13■□□□□ 0.49
CXCL1-202ENST00000509101 MAFBQ9Y5Q3 323 aaPredicted RBP18.13■□□□□ 0.49
CXCL1-202ENST00000509101 RIF1Q5UIP0 2472 aaKnown RBP18.12■□□□□ 0.49
CXCL1-202ENST00000509101 C2orf16Q68DN1 1984 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 ZBTB43O43298 467 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 CLASP2O75122 1294 aaKnown RBP18.12■□□□□ 0.49
CXCL1-202ENST00000509101 PSAPP07602 524 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 METAP2P50579 478 aaKnown RBP eCLIP18.12■□□□□ 0.49
CXCL1-202ENST00000509101 ITIH3Q06033 890 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 RARS2Q5T160 578 aaKnown RBP18.12■□□□□ 0.49
CXCL1-202ENST00000509101 EFCAB12Q6NXP0 572 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 ASCL5Q7RTU5 278 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 TMEM105Q8N8V8 129 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 HELQQ8TDG4 1101 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 ESYT1Q9BSJ8 1104 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 ADAM7Q9H2U9 754 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 ADAMTS10Q9H324 1103 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 ANO2Q9NQ90 1003 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 BRPF3Q9ULD4 1205 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 PTPRZ1P23471 2315 aaPredicted RBP18.12■□□□□ 0.49
CXCL1-202ENST00000509101 FAM186AA6NE01 2351 aa18.12■□□□□ 0.49
CXCL1-202ENST00000509101 GOLGA8AA7E2F4 631 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 GOLGA8BA8MQT2 603 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 NT5C1B-RDH14C9J2C7 533 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 PROB1E7EW31 1015 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 ASGR2P07307 311 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 FGFR4P22455 802 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 EIF4BP23588 611 aaKnown RBP18.11■□□□□ 0.49
CXCL1-202ENST00000509101 MTHFRP42898 656 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 SETQ01105 290 aaPredicted RBP18.11■□□□□ 0.49
CXCL1-202ENST00000509101 SMAP1Q8IYB5 467 aaPredicted RBP18.11■□□□□ 0.49
CXCL1-202ENST00000509101 LINC01465Q8N7H1 131 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 MRPL43Q8N983 215 aaKnown RBP18.11■□□□□ 0.49
CXCL1-202ENST00000509101 CRYGNQ8WXF5 182 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 FAM167AQ96KS9 214 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 SCLT1Q96NL6 688 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 TBC1D22BQ9NU19 505 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 SAMM50Q9Y512 469 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 PCDHA10Q9Y5I2 948 aa18.11■□□□□ 0.49
CXCL1-202ENST00000509101 ADAMTS3O15072 1205 aa18.1■□□□□ 0.49
CXCL1-202ENST00000509101 MAGEB2O15479 319 aa18.1■□□□□ 0.49
CXCL1-202ENST00000509101 CYP3A4P08684 503 aa18.1■□□□□ 0.49
CXCL1-202ENST00000509101 GPC3P51654 580 aa18.1■□□□□ 0.49
CXCL1-202ENST00000509101 C12orf76Q8N812 135 aaPredicted RBP18.1■□□□□ 0.49
CXCL1-202ENST00000509101 TDRD5Q8NAT2 981 aaKnown RBP18.1■□□□□ 0.49
CXCL1-202ENST00000509101 KLF18A0A0U1RQI7 1052 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.09■□□□□ 0.49
CXCL1-202ENST00000509101 PRR23AA6NEV1 266 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 TMOD1P28289 359 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 CDC27P30260 824 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 BCAR1P56945 870 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 PRKCEQ02156 737 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 PRR16Q569H4 304 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 KIAA1841Q6NSI8 718 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 KANK3Q6NY19 840 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 ZNF598Q86UK7 904 aaKnown RBP18.09■□□□□ 0.49
CXCL1-202ENST00000509101 AUTS2Q8WXX7 1259 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 TMEM169Q96HH4 297 aa18.09■□□□□ 0.49
CXCL1-202ENST00000509101 MRPL9Q9BYD2 267 aaKnown RBP18.09■□□□□ 0.49
CXCL1-202ENST00000509101 A0A0U1RQF3 1178 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 ZNF862O60290 1169 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
CXCL1-202ENST00000509101 CXCL14O95715 111 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 OATP04181 439 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 DARSP14868 501 aaKnown RBP18.08■□□□□ 0.48
CXCL1-202ENST00000509101 EPCAMP16422 314 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 PFKFB3Q16875 520 aaPredicted RBP18.08■□□□□ 0.48
CXCL1-202ENST00000509101 REXO1Q8N1G1 1221 aaKnown RBP18.08■□□□□ 0.48
CXCL1-202ENST00000509101 NLRP7Q8WX94 980 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 ZBP1Q9H171 429 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 MFSD1Q9H3U5 465 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 FAM217BQ9NTX9 383 aaPredicted RBP18.08■□□□□ 0.48
CXCL1-202ENST00000509101 DZANK1Q9NVP4 752 aa18.08■□□□□ 0.48
CXCL1-202ENST00000509101 DBR1Q9UK59 544 aaKnown RBP18.08■□□□□ 0.48
CXCL1-202ENST00000509101 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.48
CXCL1-202ENST00000509101 WDR64B1ANS9 1081 aa18.07■□□□□ 0.48
CXCL1-202ENST00000509101 EOMESO95936 686 aa18.07■□□□□ 0.48
CXCL1-202ENST00000509101 NBL1P41271 181 aa18.07■□□□□ 0.48
CXCL1-202ENST00000509101 ALDH7A1P49419 539 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms