RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 COL4A3BPQ9Y5P4 624 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 OTOFQ9HC10 1997 aa12.05□□□□□ -0.48
SH3RF1-203ENST00000508685 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 GRID2IPA4D2P6 1211 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 LRRC53A6NM62 1247 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 SPDYE16A6NNV3 312 aaPredicted RBP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 ATP9AO75110 1047 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 FDX1P10109 184 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 EPB41P11171 864 aaKnown RBP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 EPHX2P34913 555 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 KCNA1Q09470 495 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 PLS1Q14651 629 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 EPHA7Q15375 998 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 C10orf76Q5T2E6 689 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 ARHGEF16Q5VV41 709 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 C1orf186Q6ZWK4 172 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 BAP1Q92560 729 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 FAM207AQ9NSI2 230 aaPredicted RBP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 SAMM50Q9Y512 469 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 DUSP10Q9Y6W6 482 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 SCN4AP35499 1836 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 ZNF185O15231 689 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 SHOX2O60902 331 aaPredicted RBP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 PHACTR2O75167 634 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 GGCXP38435 758 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 SFMBT2Q5VUG0 894 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 LRRC31Q6UY01 552 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 EPM2AIP1Q7L775 607 aaPredicted RBP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 NIPA1Q7RTP0 329 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 MIER3Q7Z3K6 550 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 PNMA8AQ86V59 439 aaPredicted RBP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 IFT20Q8IY31 132 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 CAVIN3Q969G5 261 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 TEX13BQ9BXU2 312 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 STIM2Q9P246 746 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 TFR2Q9UP52 801 aa12.04□□□□□ -0.48
SH3RF1-203ENST00000508685 GOLGA6CA6NDK9 693 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 EPHB6O15197 1021 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 GCNT3O95395 438 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 MOCS3O95396 460 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 GOLGA6DP0CG33 693 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 OAZ1P54368 228 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 TRMT1LQ7Z2T5 733 aaKnown RBP12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 KCTD17Q8N5Z5 321 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 NACC1Q96RE7 527 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 SH2D3AQ9BRG2 576 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 GOLGA6AQ9NYA3 693 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 PAPPA2Q9BXP8 1791 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 PLEKP08567 350 aaPredicted RBP12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 NR2F2P24468 414 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 NMT1P30419 496 aaKnown RBP12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 FSTL1Q12841 308 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 KNOP1Q1ED39 458 aaKnown RBP12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 CCDC40Q4G0X9 1142 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 EAPPQ56P03 285 aaPredicted RBP12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 DNAJC21Q5F1R6 531 aaKnown RBP12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 SAMD3Q8N6K7 520 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 CLMNQ96JQ2 1002 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 LRRC1Q9BTT6 524 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 OLFML3Q9NRN5 406 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 TMEM51Q9NW97 253 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 CYP39A1Q9NYL5 469 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 PNMA2Q9UL42 364 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 CSADQ9Y600 493 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 CAPN6Q9Y6Q1 641 aa12.03□□□□□ -0.48
SH3RF1-203ENST00000508685 PTPRFP10586 1907 aa12.02□□□□□ -0.48
SH3RF1-203ENST00000508685 ASTN1O14525 1302 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 TMEM150BA6NC51 233 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 BTNL10A8MVZ5 291 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 AGPSO00116 658 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 CES2O00748 559 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 IRF6O14896 467 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 ATP2A1O14983 1001 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 PPP1R12BO60237 982 aaPredicted RBP12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 FAM13AO94988 1023 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 CCNE2O96020 404 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 NR3C2P08235 984 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 ANXA13P27216 316 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 ADAM9Q13443 819 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 UGCGQ16739 394 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 EDRF1Q3B7T1 1238 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 ZC2HC1CQ53FD0 456 aaPredicted RBP12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 SH3D19Q5HYK7 790 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 C8orf74Q6P047 294 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 SND1Q7KZF4 910 aaKnown RBP eCLIP12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 EIF1ADQ8N9N8 165 aaKnown RBP12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 SMCR8Q8TEV9 937 aaPredicted RBP12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 RUFY1Q96T51 708 aa12.02□□□□□ -0.49
SH3RF1-203ENST00000508685 ELP3Q9H9T3 547 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms