RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PLA2G4FQ68DD2 849 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 CRIPAKQ8N1N5 446 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 FIBCD1Q8N539 461 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 PSPC1Q8WXF1 523 aaKnown RBP22.2■■□□□ 1.14
SFXN1-209ENST00000508290 LINC01599Q8WXQ3 324 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 TMX1Q9H3N1 280 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 ELAC1Q9H777 363 aaKnown RBP22.2■■□□□ 1.14
SFXN1-209ENST00000508290 LRFN2Q9ULH4 789 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 TMEM150BA6NC51 233 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 DGAT1O75907 488 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 ARHGEF15O94989 841 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 SFPQP23246 707 aaKnown RBP eCLIP22.19■■□□□ 1.14
SFXN1-209ENST00000508290 FXR2P51116 673 aaKnown RBP eCLIP22.19■■□□□ 1.14
SFXN1-209ENST00000508290 NPEPPSP55786 919 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 PDIA5Q14554 519 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 MCTP1Q6DN14 999 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 RTN4RL1Q86UN2 441 aaPredicted RBP22.19■■□□□ 1.14
SFXN1-209ENST00000508290 CMTR2Q8IYT2 770 aaKnown RBP22.19■■□□□ 1.14
SFXN1-209ENST00000508290 SLC17A8Q8NDX2 589 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 RSPH1Q8WYR4 309 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 ZNF689Q96CS4 500 aaPredicted RBP22.19■■□□□ 1.14
SFXN1-209ENST00000508290 ADAM2Q99965 735 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 POLR3CQ9BUI4 534 aaPredicted RBP22.19■■□□□ 1.14
SFXN1-209ENST00000508290 RC3H2Q9HBD1 1191 aaKnown RBP22.19■■□□□ 1.14
SFXN1-209ENST00000508290 CHST12Q9NRB3 414 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 DACT1Q9NYF0 836 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 PCDHB7Q9Y5E2 793 aa22.19■■□□□ 1.14
SFXN1-209ENST00000508290 POTEMA6NI47 508 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 HOXA2O43364 376 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 RPA1P27694 616 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 PRPHP41219 470 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 MXD4Q14582 209 aaPredicted RBP22.18■■□□□ 1.14
SFXN1-209ENST00000508290 PCBP1Q15365 356 aaKnown RBP eCLIP22.18■■□□□ 1.14
SFXN1-209ENST00000508290 RHPN2Q8IUC4 686 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 FBXO22Q8NEZ5 403 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 NACC1Q96RE7 527 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 PPP1R16BQ96T49 567 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 CERS4Q9HA82 394 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 COL4A3BPQ9Y5P4 624 aa22.18■■□□□ 1.14
SFXN1-209ENST00000508290 C9IYK1 514 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 RB1P06400 928 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 TECP42680 631 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 FAM189BP81408 668 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 DRP2Q13474 957 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 BTG3Q14201 252 aaPredicted RBP22.17■■□□□ 1.14
SFXN1-209ENST00000508290 DSC3Q14574 896 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 EMC2Q15006 297 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 LARP1BQ659C4 914 aaKnown RBP22.17■■□□□ 1.14
SFXN1-209ENST00000508290 CLP1Q92989 425 aaKnown RBP22.17■■□□□ 1.14
SFXN1-209ENST00000508290 INTS4Q96HW7 963 aaKnown RBP22.17■■□□□ 1.14
SFXN1-209ENST00000508290 MTRQ99707 1265 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 SH2D3AQ9BRG2 576 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 TMEM161AQ9NX61 479 aa22.17■■□□□ 1.14
SFXN1-209ENST00000508290 DBR1Q9UK59 544 aaKnown RBP22.17■■□□□ 1.14
SFXN1-209ENST00000508290 COL6A3P12111 3177 aa22.16■■□□□ 1.14
SFXN1-209ENST00000508290 TOB1P50616 345 aaPredicted RBP22.16■■□□□ 1.14
SFXN1-209ENST00000508290 GRB10Q13322 594 aa22.16■■□□□ 1.14
SFXN1-209ENST00000508290 BRAPQ7Z569 592 aa22.16■■□□□ 1.14
SFXN1-209ENST00000508290 C4orf32Q8N8J7 132 aa22.16■■□□□ 1.14
SFXN1-209ENST00000508290 ATP6V0A4Q9HBG4 840 aa22.16■■□□□ 1.14
SFXN1-209ENST00000508290 MTCH2Q9Y6C9 303 aa22.16■■□□□ 1.14
SFXN1-209ENST00000508290 TTC3P53804 2025 aa22.16■■□□□ 1.14
SFXN1-209ENST00000508290 A0A087WZ62 844 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 C5orf67F2Z3F1 127 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 SKIP12755 728 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 RARRES1P49788 294 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 POU5F1BQ06416 359 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 PTGDRQ13258 359 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 TFDP1Q14186 410 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 PTPROQ16827 1216 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 EPC2Q52LR7 807 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 SRGAP1Q7Z6B7 1085 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 CATSPER3Q86XQ3 398 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.15■■□□□ 1.14
SFXN1-209ENST00000508290 TMEM192Q8IY95 271 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 PRPF31Q8WWY3 499 aaKnown RBP22.15■■□□□ 1.14
SFXN1-209ENST00000508290 NLRP4Q96MN2 994 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 FDXACB1Q9BRP7 624 aaPredicted RBP22.15■■□□□ 1.14
SFXN1-209ENST00000508290 C17orf80Q9BSJ5 609 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 C11orf84Q9BUA3 381 aaPredicted RBP22.15■■□□□ 1.14
SFXN1-209ENST00000508290 TRAIPQ9BWF2 469 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 PLVAPQ9BX97 442 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.15■■□□□ 1.14
SFXN1-209ENST00000508290 LRWD1Q9UFC0 647 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 MTUS1Q9ULD2 1270 aa22.15■■□□□ 1.14
SFXN1-209ENST00000508290 CHD7Q9P2D1 2997 aa22.14■■□□□ 1.14
SFXN1-209ENST00000508290 EVPLQ92817 2033 aa22.14■■□□□ 1.14
SFXN1-209ENST00000508290 EPOPA6NHQ4 379 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 H3BNC9 293 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 MGEA5O60502 916 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 BMP15O95972 392 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 SPATA31C1P0DKV0 1188 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 NAALADL2Q58DX5 795 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 DTHD1Q6ZMT9 781 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 FERMT3Q86UX7 667 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 KCTD17Q8N5Z5 321 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 IGSF22Q8N9C0 903 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 ZNF579Q8NAF0 562 aaKnown RBP22.14■■□□□ 1.13
SFXN1-209ENST00000508290 MCPH1Q8NEM0 835 aa22.14■■□□□ 1.13
SFXN1-209ENST00000508290 PCDHB6Q9Y5E3 794 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms