RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 CXorf67Q86X51 503 aaPredicted RBP2.4□□□□□ -2.03
SMN2-208ENST00000508258 NME9Q86XW9 330 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 RBM12BQ8IXT5 1001 aaKnown RBP2.4□□□□□ -2.03
SMN2-208ENST00000508258 AMOTL1Q8IY63 956 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 TMEFF1Q8IYR6 380 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 ADGRG2Q8IZP9 1017 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 NETO2Q8NC67 525 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 TTLL11Q8NHH1 800 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 SLC35G2Q8TBE7 412 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 SEC14L1Q92503 715 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 RTF1Q92541 710 aaKnown RBP2.4□□□□□ -2.03
SMN2-208ENST00000508258 RUNDC1Q96C34 613 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 FOXRED1Q96CU9 486 aaPredicted RBP2.4□□□□□ -2.03
SMN2-208ENST00000508258 CLIP3Q96DZ5 547 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 C20orf173Q96LM9 149 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 SARGQ9BW04 601 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 ADAM7Q9H2U9 754 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 SEMA4AQ9H3S1 761 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 BCAS3Q9H6U6 928 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 EPB41L4AQ9HCS5 686 aaPredicted RBP2.4□□□□□ -2.03
SMN2-208ENST00000508258 DDX21Q9NR30 783 aaKnown RBP eCLIP2.4□□□□□ -2.03
SMN2-208ENST00000508258 USP40Q9NVE5 1235 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 MYOTQ9UBF9 498 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 NUDT5Q9UKK9 219 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 INVSQ9Y283 1065 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 NUB1Q9Y5A7 615 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 PMF1-BGLAPU3KQ54 211 aa2.4□□□□□ -2.03
SMN2-208ENST00000508258 A0A1B0GTL3 188 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 TCRBV5S2A0A599 114 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 ANO9A1A5B4 782 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 GOLGA6L22H0YM25 854 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 ELL2O00472 640 aaPredicted RBP2.39□□□□□ -2.03
SMN2-208ENST00000508258 FOXP2O15409 715 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 SRGAP3O43295 1099 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 XPOTO43592 962 aaKnown RBP2.39□□□□□ -2.03
SMN2-208ENST00000508258 IL33O95760 270 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 POU2F2P09086 479 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 NCAM1P13591 858 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 PHKG2P15735 406 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 C5AR1P21730 350 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 KCNC1P48547 511 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 ADKP55263 362 aaKnown RBP2.39□□□□□ -2.03
SMN2-208ENST00000508258 MRPS9P82933 396 aaKnown RBP2.39□□□□□ -2.03
SMN2-208ENST00000508258 GRM3Q14832 879 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 PITRM1Q5JRX3 1037 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 ATAT1Q5SQI0 421 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 KSR2Q6VAB6 950 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 CHST15Q7LFX5 561 aaPredicted RBP2.39□□□□□ -2.03
SMN2-208ENST00000508258 KANSL1Q7Z3B3 1105 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 RTN4RL1Q86UN2 441 aaPredicted RBP2.39□□□□□ -2.03
SMN2-208ENST00000508258 DCP2Q8IU60 420 aaKnown RBP2.39□□□□□ -2.03
SMN2-208ENST00000508258 PHYKPLQ8IUZ5 450 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 LYSMD2Q8IV50 215 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 TRIM48Q8IWZ4 208 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 FAM43AQ8N2R8 423 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 LINC01356Q8N9X3 169 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 PJA1Q8NG27 643 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 TGFBRAP1Q8WUH2 860 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 ASB15Q8WXK1 588 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 TIFAQ96CG3 184 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 TAAR9Q96RI9 348 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 ANO3Q9BYT9 981 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 WNT8AQ9H1J5 351 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 NMRK2Q9NPI5 230 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 DNAJC28Q9NX36 388 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 HSPBP1Q9NZL4 362 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 BTBD7Q9P203 1132 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 DDX20Q9UHI6 824 aaKnown RBP2.39□□□□□ -2.03
SMN2-208ENST00000508258 MSRAQ9UJ68 235 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 RCAN3Q9UKA8 241 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 TMPRSS11EQ9UL52 423 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 PLA2G2DQ9UNK4 145 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 PTPN22Q9Y2R2 807 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 PCDHB4Q9Y5E5 795 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 PPP2R3BQ9Y5P8 575 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 GPR45Q9Y5Y3 372 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 COMMD10Q9Y6G5 202 aa2.39□□□□□ -2.03
SMN2-208ENST00000508258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 PRSS38A1L453 326 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 NDUFS2O75306 463 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 MPIG6BO95866 241 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 LDHAP00338 332 aaKnown RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 PRLP01236 227 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 MMEP08473 750 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 MTHFD2P13995 350 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 ATF2P15336 505 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 FAHP16930 419 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 HSPA6P17066 643 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 AOAHP28039 575 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 THBS2P35442 1172 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 USP14P54578 494 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 SRSF2Q01130 221 aaKnown RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 PLP2Q04941 152 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 DBPQ10586 325 aaPredicted RBP2.38□□□□□ -2.03
SMN2-208ENST00000508258 MYBPC3Q14896 1274 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 ACAP2Q15057 778 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 CLUL1Q15846 466 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 UGT8Q16880 541 aa2.38□□□□□ -2.03
SMN2-208ENST00000508258 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.38□□□□□ -2.03
SMN2-208ENST00000508258 MUM1Q2TAK8 710 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms