RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 A0A0A6YYJ9 748 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 OPHN1O60890 802 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 MAFO75444 373 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 RFPL1O75677 317 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 SCGB1D2O95969 90 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 GLDCP23378 1020 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 MTNR1BP49286 362 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 SLC5A3P53794 718 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 LGALS4P56470 323 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 TRIM25Q14258 630 aaKnown RBP5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 RTP5Q14D33 572 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 TMEM240Q5SV17 173 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 CCDC181Q5TID7 509 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 KCNK18Q7Z418 384 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 BMP8AQ7Z5Y6 402 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 LYSMD2Q8IV50 215 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 WDR75Q8IWA0 830 aaKnown RBP5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 TMEFF1Q8IYR6 380 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 AUTS2Q8WXX7 1259 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 JADE3Q92613 823 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 FAM84AQ96KN4 292 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 NOL10Q9BSC4 688 aaKnown RBP5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 RHOBTB2Q9BYZ6 727 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 PITHD1Q9GZP4 211 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 PRDM12Q9H4Q4 367 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 ZNF277Q9NRM2 450 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 DPP7Q9UHL4 492 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 PRSS50Q9UI38 385 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 SYNPO2Q9UMS6 1093 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 GIT1Q9Y2X7 761 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 PCDHB6Q9Y5E3 794 aa5.37□□□□□ -1.55
HMGB1P28-201ENST00000507778 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 H0Y858 1186 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 CUTAO60888 179 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 FARP2O94887 1054 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 KNG1P01042 644 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 AGXTP21549 392 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 IL13P35225 146 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 GPR15P49685 360 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 HTRA3P83110 453 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 PPARAQ07869 468 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 MESP2Q0VG99 397 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 SPIDRQ14159 915 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 DGKDQ16760 1214 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 MUM1Q2TAK8 710 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 TRMT10BQ6PF06 316 aaKnown RBP5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 NOL8Q76FK4 1167 aaKnown RBP5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 OTOP2Q7RTS6 562 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 FAM129CQ86XR2 697 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 CDYL2Q8N8U2 506 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 OR14C36Q8NHC7 312 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 GAB3Q8WWW8 586 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 TEKT5Q96M29 485 aa5.36□□□□□ -1.55
HMGB1P28-201ENST00000507778 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 IL33O95760 270 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 MED14OSP0DP75 135 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 PF4V1P10720 104 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 OSMP13725 252 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 VCAM1P19320 739 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 ADCY8P40145 1251 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 MLLT6P55198 1093 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 CDK17Q00537 523 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 CCDC178Q5BJE1 867 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 FAM102BQ5T8I3 360 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 GRAMD4Q6IC98 578 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 CNKSR3Q6P9H4 555 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 SLC41A1Q8IVJ1 513 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 CMTR2Q8IYT2 770 aaKnown RBP5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 MYO1HQ8N1T3 1032 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 FNIP1Q8TF40 1166 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 HSPBAP1Q96EW2 488 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 CCDC136Q96JN2 1154 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 HIST1H2AHQ96KK5 128 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 PWWP2AQ96N64 755 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 HIST1H2AJQ99878 128 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 IFT122Q9HBG6 1241 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 SAE1Q9UBE0 346 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 FBXO10Q9UK96 956 aa5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 PNMA8BQ9ULN7 279 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 NOB1Q9ULX3 412 aaKnown RBP5.35□□□□□ -1.55
HMGB1P28-201ENST00000507778 A0A0G2JNJ9 132 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 TCAF2A6NFQ2 919 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 NRP2O60462 931 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 U2AF1L5P0DN76 240 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 COL6A1P12109 1028 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 PI3P19957 117 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 XPAP23025 273 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 ANTXR2P58335 489 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 U2AF1Q01081 240 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 ANO4Q32M45 955 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 PRR31Q5SQ13 230 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 MBNL2Q5VZF2 373 aaKnown RBP5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 NXNQ6DKJ4 435 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 ATG14Q6ZNE5 492 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 TCEAL8Q8IYN2 117 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 OR5AN1Q8NGI8 311 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
HMGB1P28-201ENST00000507778 FATE1Q969F0 183 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms