RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 STBD1O95210 358 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 DARSP14868 501 aaKnown RBP17.43■□□□□ 0.38
COL1A1-211ENST00000507689 SARSP49591 514 aaKnown RBP17.43■□□□□ 0.38
COL1A1-211ENST00000507689 NCBP1Q09161 790 aaKnown RBP17.43■□□□□ 0.38
COL1A1-211ENST00000507689 PTGDRQ13258 359 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 TFDP1Q14186 410 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 BTG3Q14201 252 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-211ENST00000507689 MXD4Q14582 209 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-211ENST00000507689 EMC2Q15006 297 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 BRAPQ7Z569 592 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 MICALL1Q8N3F8 863 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 SLC17A8Q8NDX2 589 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 FBXO22Q8NEZ5 403 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 ZNF668Q96K58 619 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-211ENST00000507689 POLR3CQ9BUI4 534 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-211ENST00000507689 ADAMTS10Q9H324 1103 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 GBF1Q92538 1859 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 MICAL3Q7RTP6 2002 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 HOXA2O43364 376 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 MUTP22033 750 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 CCT6AP40227 531 aaKnown RBP17.42■□□□□ 0.38
COL1A1-211ENST00000507689 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL1A1-211ENST00000507689 ERVK-21P61565 698 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 CUL4AQ13619 759 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 PDIA5Q14554 519 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 KRT79Q5XKE5 535 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 FAM228AQ86W67 206 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 TMEM40Q8WWA1 233 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 PPM1EQ8WY54 764 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 TMEM143Q96AN5 459 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 INTS4Q96HW7 963 aaKnown RBP17.42■□□□□ 0.38
COL1A1-211ENST00000507689 DHX33Q9H6R0 707 aaKnown RBP17.42■□□□□ 0.38
COL1A1-211ENST00000507689 RGS18Q9NS28 235 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 BMP2KQ9NSY1 1161 aaPredicted RBP17.42■□□□□ 0.38
COL1A1-211ENST00000507689 WRAP73Q9P2S5 460 aaPredicted RBP17.42■□□□□ 0.38
COL1A1-211ENST00000507689 PCDHB6Q9Y5E3 794 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 ADGRA3Q8IWK6 1321 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 LAMA3Q16787 3333 aa17.42■□□□□ 0.38
COL1A1-211ENST00000507689 A0A087WZ62 844 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 ARHGEF35A5YM69 484 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 BMP15O95972 392 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 SRGAP2CP0DJJ0 459 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 RPA1P27694 616 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 PRPHP41219 470 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 PHKA2P46019 1235 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 NBR1Q14596 966 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 PTPROQ16827 1216 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 CATSPER4Q7RTX7 472 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 ABI1Q8IZP0 508 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 SP7Q8TDD2 431 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-211ENST00000507689 PIGOQ8TEQ8 1089 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 PRPF31Q8WWY3 499 aaKnown RBP17.41■□□□□ 0.38
COL1A1-211ENST00000507689 FDXACB1Q9BRP7 624 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-211ENST00000507689 TMX1Q9H3N1 280 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 CHST12Q9NRB3 414 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 EVPLQ92817 2033 aa17.41■□□□□ 0.38
COL1A1-211ENST00000507689 SKIP12755 728 aa17.4■□□□□ 0.38
COL1A1-211ENST00000507689 LAMTOR4Q0VGL1 99 aa17.4■□□□□ 0.38
COL1A1-211ENST00000507689 DRP2Q13474 957 aa17.4■□□□□ 0.38
COL1A1-211ENST00000507689 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
COL1A1-211ENST00000507689 SPOUT1Q5T280 376 aaKnown RBP17.4■□□□□ 0.38
COL1A1-211ENST00000507689 CATSPER3Q86XQ3 398 aa17.4■□□□□ 0.38
COL1A1-211ENST00000507689 MCPH1Q8NEM0 835 aa17.4■□□□□ 0.38
COL1A1-211ENST00000507689 SNX29Q8TEQ0 813 aa17.4■□□□□ 0.38
COL1A1-211ENST00000507689 CEP89Q96ST8 783 aa17.4■□□□□ 0.38
COL1A1-211ENST00000507689 AAASQ9NRG9 546 aa17.4■□□□□ 0.38
COL1A1-211ENST00000507689 DBR1Q9UK59 544 aaKnown RBP17.4■□□□□ 0.38
COL1A1-211ENST00000507689 WDR81Q562E7 1941 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 USO1O60763 962 aaKnown RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 DGKIO75912 1065 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 ERLIN2O94905 339 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 CTNNB1P35222 781 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 RARRES1P49788 294 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 CCDC85BQ15834 202 aaPredicted RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 SRGAP1Q7Z6B7 1085 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 RTN4RL1Q86UN2 441 aaPredicted RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 TMEM192Q8IY95 271 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 CMTR2Q8IYT2 770 aaKnown RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 ZNF579Q8NAF0 562 aaKnown RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 RNF149Q8NC42 400 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 RNF169Q8NCN4 708 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 LINC01599Q8WXQ3 324 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 ELAC1Q9H777 363 aaKnown RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 TMEM161AQ9NX61 479 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 PIN4Q9Y237 131 aaKnown RBP17.39■□□□□ 0.37
COL1A1-211ENST00000507689 SIP14410 1827 aa17.39■□□□□ 0.37
COL1A1-211ENST00000507689 ZBTB39O15060 712 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 MED24O75448 989 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 RB1P06400 928 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 PCBP1Q15365 356 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL1A1-211ENST00000507689 PAN2Q504Q3 1202 aaKnown RBP17.38■□□□□ 0.37
COL1A1-211ENST00000507689 EPC2Q52LR7 807 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 POTEGQ6S5H5 508 aa17.38■□□□□ 0.37
COL1A1-211ENST00000507689 FERMT3Q86UX7 667 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms