RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TBC1D8BQ0IIM8 1120 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 STK3Q13188 491 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 Q4G0T1 1027 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 BLIDQ8IZY5 108 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 DAGLBQ8NCG7 672 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 RDM1Q8NG50 284 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 MICAL1Q8TDZ2 1067 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 ZNF274Q96GC6 653 aaPredicted RBP13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 AIFM3Q96NN9 605 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 POP1Q99575 1024 aaKnown RBP13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 TMEM117Q9H0C3 514 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 TLE6Q9H808 572 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 TLR9Q9NR96 1032 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 RNF19AQ9NV58 838 aa13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 SEPT9Q9UHD8 586 aaPredicted RBP13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
HMGCS1-204ENST00000507293 TMEM150BA6NC51 233 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 HOXA2O43364 376 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 EYA4O95677 639 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 DARSP14868 501 aaKnown RBP13□□□□□ -0.33
HMGCS1-204ENST00000507293 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
HMGCS1-204ENST00000507293 FGFR4P22455 802 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 COASYQ13057 564 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 DRP2Q13474 957 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 TARBP2Q15633 366 aaKnown RBP13□□□□□ -0.33
HMGCS1-204ENST00000507293 NPY5RQ15761 445 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 CSPP1Q1MSJ5 1256 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 MTERF2Q49AM1 385 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 CPLX2Q6PUV4 134 aaKnown RBP13□□□□□ -0.33
HMGCS1-204ENST00000507293 ECHDC2Q86YB7 292 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 LRRC43Q8N309 656 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 NLRP7Q8WX94 980 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 CASD1Q96PB1 797 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 TM6SF1Q9BZW5 370 aa13□□□□□ -0.33
HMGCS1-204ENST00000507293 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
HMGCS1-204ENST00000507293 CYP3A7-CYP3A51PA0A087WV96 503 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 FSCN2O14926 492 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 PER2O15055 1255 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 STBD1O95210 358 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 CYP3A7P24462 503 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 ERVFC1P60507 584 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 RBM10P98175 930 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 NONOQ15233 471 aaKnown RBP eCLIP12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 DUSP6Q16828 381 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 INF2Q27J81 1249 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 MOXD1Q6UVY6 613 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 B3GNT9Q6UX72 402 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 LRRC55Q6ZSA7 311 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 RNF135Q8IUD6 432 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 ABI1Q8IZP0 508 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 RNF169Q8NCN4 708 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 SMRP1Q8NCR6 262 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 ETNPPLQ8TBG4 499 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 MRPS27Q92552 414 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 MBOAT7Q96N66 472 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 CEP89Q96ST8 783 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 SH2D3AQ9BRG2 576 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 NIFKQ9BYG3 293 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 MUTYHQ9UIF7 546 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
HMGCS1-204ENST00000507293 SLC37A4O43826 429 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 PBX3P40426 434 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 PLPP4Q5VZY2 271 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 PDE12Q6L8Q7 609 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 KCNT2Q6UVM3 1135 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 KRT25Q7Z3Z0 450 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 FAM177A1Q8N128 213 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 VN1R2Q8NFZ6 395 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 ZNF558Q96NG5 402 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 DDX25Q9UHL0 483 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 LZTS1Q9Y250 596 aa12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 USP15Q9Y4E8 981 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-204ENST00000507293 A0A0U1RQF3 1178 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 DDX11L8A8MPP1 907 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 CSDE1O75534 798 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 ATF7P17544 494 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 PPM1AP35813 382 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 PLCB3Q01970 1234 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 SCRN1Q12765 414 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 HERC4Q5GLZ8 1057 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 PLA2G4FQ68DD2 849 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 ZNF598Q86UK7 904 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 HELQQ8TDG4 1101 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 CDCA3Q99618 268 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 TCF25Q9BQ70 676 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 GCOM2Q9BZD3 368 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 ENTPD7Q9NQZ7 604 aa12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 PUF60Q9UHX1 559 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-204ENST00000507293 STK36Q9NRP7 1315 aa12.96□□□□□ -0.33
HMGCS1-204ENST00000507293 A0A087WZ62 844 aa12.96□□□□□ -0.33
HMGCS1-204ENST00000507293 IGKV6-21A0A0C4DH24 114 aa12.96□□□□□ -0.33
HMGCS1-204ENST00000507293 CCDC194A0A1B0GVG4 234 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms