RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 LOC285556D6RIA3 1793 aa5.67□□□□□ -1.5
CPNE4-207ENST00000506687 ZFHX4Q86UP3 3567 aa5.67□□□□□ -1.5
CPNE4-207ENST00000506687 BDP1A6H8Y1 2624 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 MYH4Q9Y623 1939 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 MUC6Q6W4X9 2439 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 E2F8A0AVK6 867 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 TSPY2A6NKD2 308 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 F5H6K3 240 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 MPHOSPH10O00566 681 aaKnown RBP5.66□□□□□ -1.5
CPNE4-207ENST00000506687 TBX3O15119 743 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 RANBP6O60518 1105 aaKnown RBP5.66□□□□□ -1.5
CPNE4-207ENST00000506687 GFRA3O60609 400 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 SASH3O75995 380 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 TTLL1O95922 423 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 TSPY3P0CV98 308 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 TSPY8P0CW00 308 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 ALADP13716 330 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 GUCY2CP25092 1073 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 KLRC3Q07444 240 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 FAAP100Q0VG06 881 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 ADGRE1Q14246 886 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 SLC10A6Q3KNW5 377 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 FNDC3BQ53EP0 1204 aaKnown RBP5.66□□□□□ -1.5
CPNE4-207ENST00000506687 INO80DQ53TQ3 878 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-207ENST00000506687 RRP12Q5JTH9 1297 aaKnown RBP5.66□□□□□ -1.5
CPNE4-207ENST00000506687 FAM209AQ5JX71 171 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 NXNQ6DKJ4 435 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 IL31Q6EBC2 164 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 CATSPERGQ6ZRH7 1159 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 KRT25Q7Z3Z0 450 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 NCAPG2Q86XI2 1143 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 FBXL16Q8N461 479 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 ENAHQ8N8S7 591 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-207ENST00000506687 ZSCAN1Q8NBB4 408 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 GMCL1P1Q8NEA9 526 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 NCOA7Q8NI08 942 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 MARVELD3Q96A59 401 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 COA7Q96BR5 231 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 CHMP4CQ96CF2 233 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 EXOC2Q96KP1 924 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 CNTNAP3BQ96NU0 1288 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 CDC6Q99741 560 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 TMEM47Q9BQJ4 181 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 CNTNAP3Q9BZ76 1288 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 GRIP2Q9C0E4 1043 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 PRDM12Q9H4Q4 367 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 CASS4Q9NQ75 786 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 CLIP2Q9UDT6 1046 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 ADAMTS5Q9UNA0 930 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 MRPS23Q9Y3D9 190 aaKnown RBP5.66□□□□□ -1.5
CPNE4-207ENST00000506687 DAAM1Q9Y4D1 1078 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 SNX14Q9Y5W7 946 aa5.66□□□□□ -1.5
CPNE4-207ENST00000506687 SUSD5O60279 629 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 PLA2G6O60733 806 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 NDUFB10O96000 172 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 F2P00734 622 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 SNHG28P0DPA3 235 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 TOP1P11387 765 aaKnown RBP5.65□□□□□ -1.5
CPNE4-207ENST00000506687 ZSCAN20P17040 1043 aaPredicted RBP5.65□□□□□ -1.5
CPNE4-207ENST00000506687 VCAM1P19320 739 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 NEK3P51956 506 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 USP14P54578 494 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 TYRO3Q06418 890 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 MORC3Q14149 939 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 NCAPHQ15003 741 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 SETDB1Q15047 1291 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 CCDC178Q5BJE1 867 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 RNF219Q5W0B1 726 aaPredicted RBP5.65□□□□□ -1.5
CPNE4-207ENST00000506687 LBX2Q6XYB7 198 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 NYAP1Q6ZVC0 841 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 Q6ZVU0 165 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 SPICE1Q8N0Z3 855 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 MYRIPQ8NFW9 859 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 JPH3Q8WXH2 748 aaPredicted RBP5.65□□□□□ -1.5
CPNE4-207ENST00000506687 HERVK_113Q902F9 699 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 LPAR1Q92633 364 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 BADQ92934 168 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 KISS1RQ969F8 398 aaPredicted RBP5.65□□□□□ -1.5
CPNE4-207ENST00000506687 GMCL1Q96IK5 515 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 NEK1Q96PY6 1258 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 TM9SF2Q99805 663 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 DHRS4Q9BTZ2 278 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 AGXT2Q9BYV1 514 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 TM6SF1Q9BZW5 370 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 ASCC2Q9H1I8 757 aaPredicted RBP5.65□□□□□ -1.5
CPNE4-207ENST00000506687 SENP2Q9HC62 589 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 USP25Q9UHP3 1055 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 PCDHB10Q9UN67 800 aa5.65□□□□□ -1.5
CPNE4-207ENST00000506687 POLR3KQ9Y2Y1 108 aaPredicted RBP5.65□□□□□ -1.5
CPNE4-207ENST00000506687 WDR19Q8NEZ3 1342 aa5.65□□□□□ -1.51
CPNE4-207ENST00000506687 DOCK3Q8IZD9 2030 aa5.65□□□□□ -1.51
CPNE4-207ENST00000506687 ZSWIM8A7E2V4 1837 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 PARP14Q460N5 1801 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 XIRP2A4UGR9 3374 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 ALPK3Q96L96 1907 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 VSTM5A8MXK1 200 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 WDR46O15213 610 aaKnown RBP5.64□□□□□ -1.51
CPNE4-207ENST00000506687 MMP20O60882 483 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 CNMDO75829 334 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 ARAFP10398 606 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms