RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TRIM8Q9BZR9 551 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 MTG2Q9H4K7 406 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 NOP58Q9Y2X3 529 aaKnown RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 VWA7Q9Y334 891 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 DUSP10Q9Y6W6 482 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 MYPNQ86TC9 1320 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 A0A0A6YYK5 440 aaPredicted RBP4.04□□□□□ -1.76
GYPB-207ENST00000506679 PRSS38A1L453 326 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 HMGCRP04035 888 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 FSCN1Q16658 493 aaKnown RBP4.04□□□□□ -1.76
GYPB-207ENST00000506679 DGKDQ16760 1214 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 INAVAQ3KP66 663 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 IQSEC1Q6DN90 963 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 BORAQ6PGQ7 559 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 GPR155Q7Z3F1 870 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 RALYLQ86SE5 291 aaKnown RBP4.04□□□□□ -1.76
GYPB-207ENST00000506679 KBTBD2Q8IY47 623 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 IFNL2Q8IZJ0 200 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 LGI4Q8N135 537 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 WDR48Q8TAF3 677 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 LMBR1Q8WVP7 490 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 RPGRQ92834 1020 aaKnown RBP4.04□□□□□ -1.76
GYPB-207ENST00000506679 ACAP3Q96P50 834 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 SOX7Q9BT81 388 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 MENTQ9BUN1 341 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 PUS7LQ9H0K6 701 aaKnown RBP4.04□□□□□ -1.76
GYPB-207ENST00000506679 ZCCHC4Q9H5U6 513 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 RTEL1Q9NZ71 1219 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 CDC42EP3Q9UKI2 254 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 PTPN22Q9Y2R2 807 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 NOC2LQ9Y3T9 749 aaKnown RBP4.04□□□□□ -1.76
GYPB-207ENST00000506679 SLC4A7Q9Y6M7 1214 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 NUMBLQ9Y6R0 609 aa4.04□□□□□ -1.76
GYPB-207ENST00000506679 A0A0G2JLL6 359 aaPredicted RBP4.03□□□□□ -1.76
GYPB-207ENST00000506679 ALG1L2C9J202 215 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 RAB11FIP3O75154 756 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 SEC24DO94855 1032 aaPredicted RBP4.03□□□□□ -1.76
GYPB-207ENST00000506679 CNOT4O95628 575 aaKnown RBP4.03□□□□□ -1.76
GYPB-207ENST00000506679 CELA3BP08861 270 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 INHBBP09529 407 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 HOXA5P20719 270 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 ENPP1P22413 925 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 GPR15P49685 360 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 STAT5BP51692 787 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 KCNQ1P51787 676 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 NFYCQ13952 458 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 TRIM25Q14258 630 aaKnown RBP4.03□□□□□ -1.76
GYPB-207ENST00000506679 PCOLCEQ15113 449 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 TBR1Q16650 682 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 FBLN7Q53RD9 439 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 CCDC178Q5BJE1 867 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 PITRM1Q5JRX3 1037 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 AGBL4Q5VU57 503 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 PLEKHH3Q7Z736 793 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 FAM124AQ86V42 546 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 CMIPQ8IY22 773 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 CBARPQ8N350 705 aaPredicted RBP4.03□□□□□ -1.76
GYPB-207ENST00000506679 CNTD1Q8N815 330 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 CDYL2Q8N8U2 506 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 TEPSINQ96N21 525 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 PRDM12Q9H4Q4 367 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 USP40Q9NVE5 1235 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 POLR3BQ9NW08 1133 aaPredicted RBP4.03□□□□□ -1.76
GYPB-207ENST00000506679 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.03□□□□□ -1.76
GYPB-207ENST00000506679 SLC5A4Q9NY91 659 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 SAE1Q9UBE0 346 aaPredicted RBP4.03□□□□□ -1.76
GYPB-207ENST00000506679 CTDP1Q9Y5B0 961 aaPredicted RBP4.03□□□□□ -1.76
GYPB-207ENST00000506679 PCDHB6Q9Y5E3 794 aa4.03□□□□□ -1.76
GYPB-207ENST00000506679 ST20-MTHFSA0A0A6YYL1 179 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 MAFGO15525 162 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 APOL3O95236 402 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 NCLP19338 710 aaKnown RBP4.02□□□□□ -1.77
GYPB-207ENST00000506679 EPHB4P54760 987 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 HGFACQ04756 655 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 MTMR1Q13613 665 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 ZMAT1Q5H9K5 638 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 KLHDC10Q6PID8 442 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 KCNK18Q7Z418 384 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 RSAD2Q8WXG1 361 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 CFHR4Q92496 578 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 FERMT2Q96AC1 680 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 AHCYL2Q96HN2 611 aaKnown RBP4.02□□□□□ -1.77
GYPB-207ENST00000506679 DYDC2Q96IM9 177 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 C20orf173Q96LM9 149 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 ANO3Q9BYT9 981 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 OSBPL6Q9BZF3 934 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 KIAA1683Q9H0B3 1180 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 MEGF9Q9H1U4 602 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 C14orf119Q9NWQ9 140 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 PRSS50Q9UI38 385 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 INVSQ9Y283 1065 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 ZDHHC9Q9Y397 364 aa4.02□□□□□ -1.77
GYPB-207ENST00000506679 TRIM75PA6NK02 468 aa4.01□□□□□ -1.77
GYPB-207ENST00000506679 FZD9O00144 591 aa4.01□□□□□ -1.77
GYPB-207ENST00000506679 MATN2O00339 956 aa4.01□□□□□ -1.77
GYPB-207ENST00000506679 PRICKLE3O43900 615 aaPredicted RBP4.01□□□□□ -1.77
GYPB-207ENST00000506679 PCDH8O95206 1070 aa4.01□□□□□ -1.77
GYPB-207ENST00000506679 CLEC2LP0C7M8 214 aa4.01□□□□□ -1.77
GYPB-207ENST00000506679 CNR2P34972 360 aa4.01□□□□□ -1.77
GYPB-207ENST00000506679 GPR3P46089 330 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms