RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PPATQ06203 517 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 ZNF746Q6NUN9 644 aaPredicted RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 HAUS6Q7Z4H7 955 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 JAKMIP2Q96AA8 810 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 CEP170P1Q96L14 293 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 EIF3CQ99613 913 aaKnown RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 MLXIPQ9HAP2 919 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 DMAC2Q9NW81 257 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 SALL4Q9UJQ4 1053 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 FAM184BQ9ULE4 1060 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 ADGRA3Q8IWK6 1321 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 LOC285556D6RIA3 1793 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 GOLGA8IPA6NC78 632 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 GOLGA8JA6NMD2 632 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 TUBB4AP04350 444 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 RPL13P26373 211 aaKnown RBP13.36□□□□□ -0.27
LIN54-206ENST00000506560 SFNP31947 248 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 CYLC1P35663 651 aaPredicted RBP13.36□□□□□ -0.27
LIN54-206ENST00000506560 PRKCEQ02156 737 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 ASTE1Q2TB18 679 aaPredicted RBP13.36□□□□□ -0.27
LIN54-206ENST00000506560 RIOX2Q8IUF8 465 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■■■ 154
LIN54-206ENST00000506560 LARSQ9P2J5 1176 aaKnown RBP13.36□□□□□ -0.27
LIN54-206ENST00000506560 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 A0A0G2JMZ2 1700 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 CCDC169A6NNP5 214 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 CYP2C8P10632 490 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 GPR162Q16538 588 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 EXOC3L4Q17RC7 722 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 ABHD15Q6UXT9 468 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 HS2ST1Q7LGA3 356 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 CHST13Q8NET6 341 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 PLEKHO2Q8TD55 490 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 TAF1DQ9H5J8 278 aaPredicted RBP13.36□□□□□ -0.27
LIN54-206ENST00000506560 GCNT4Q9P109 453 aa13.36□□□□□ -0.27
LIN54-206ENST00000506560 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
LIN54-206ENST00000506560 PUF60Q9UHX1 559 aaKnown RBP13.36□□□□□ -0.27
LIN54-206ENST00000506560 ANKRD63C9JTQ0 380 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 AKR1B10O60218 316 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 TADA3O75528 432 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 UCHL3P15374 230 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 PSMC2P35998 433 aaKnown RBP13.35□□□□□ -0.27
LIN54-206ENST00000506560 CDK17Q00537 523 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 STXBP2Q15833 593 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 KLHDC7AQ5VTJ3 777 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 USP50Q70EL3 339 aaPredicted RBP13.35□□□□□ -0.27
LIN54-206ENST00000506560 ELMO3Q96BJ8 720 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 FGD4Q96M96 766 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 DEF6Q9H4E7 631 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 SLC16A3O15427 465 aaKnown RBP13.35□□□□□ -0.27
LIN54-206ENST00000506560 EXOC3O60645 756 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 SRGAP2O75044 1071 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 UBA1P22314 1058 aaKnown RBP13.35□□□□□ -0.27
LIN54-206ENST00000506560 NPTX2P47972 431 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 MTERF2Q49AM1 385 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 SFMBT2Q5VUG0 894 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 CCDC170Q8IYT3 715 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 IFIH1Q9BYX4 1025 aaKnown RBP13.35□□□□□ -0.27
LIN54-206ENST00000506560 PCDHA13Q9Y5I0 950 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 CAPN6Q9Y6Q1 641 aa13.35□□□□□ -0.27
LIN54-206ENST00000506560 GLTPD2A6NH11 291 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 ARIH2O95376 493 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 ATP1A1P05023 1023 aaKnown RBP13.34□□□□□ -0.27
LIN54-206ENST00000506560 ADSSP30520 456 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 GPAT2Q6NUI2 795 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 PROCA1Q8NCQ7 364 aaPredicted RBP13.34□□□□□ -0.27
LIN54-206ENST00000506560 SENP7Q9BQF6 1050 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 HAUS4Q9H6D7 363 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 PRDM10Q9NQV6 1147 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 AGTPBP1Q9UPW5 1226 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 KCNH4Q9UQ05 1017 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 ARID2Q68CP9 1835 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 VAV2P52735 878 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 LY6KQ17RY6 165 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 FBXO38Q6PIJ6 1188 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 TMEM161BQ8NDZ6 487 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 MNS1Q8NEH6 495 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 PCYT2Q99447 389 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 CCDC94Q9BW85 323 aaPredicted RBP13.34□□□□□ -0.27
LIN54-206ENST00000506560 PACSIN1Q9BY11 444 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 ANKEF1Q9NU02 776 aa13.34□□□□□ -0.27
LIN54-206ENST00000506560 A0A087X0T9 212 aa13.33□□□□□ -0.27
LIN54-206ENST00000506560 MAFGO15525 162 aa13.33□□□□□ -0.27
LIN54-206ENST00000506560 EIF3JO75822 258 aaKnown RBP13.33□□□□□ -0.27
LIN54-206ENST00000506560 ADRB2P07550 413 aa13.33□□□□□ -0.27
LIN54-206ENST00000506560 PSAPP07602 524 aa13.33□□□□□ -0.27
LIN54-206ENST00000506560 FAM228BP0C875 321 aa13.33□□□□□ -0.27
LIN54-206ENST00000506560 NF2P35240 595 aa13.33□□□□□ -0.27
LIN54-206ENST00000506560 FMO5P49326 533 aa13.33□□□□□ -0.27
LIN54-206ENST00000506560 KRT83P78385 493 aa13.33□□□□□ -0.27
LIN54-206ENST00000506560 GTF2BQ00403 316 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms