RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
SCLT1-208ENST00000506368 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
SCLT1-208ENST00000506368 TECP42680 631 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 PTK2Q05397 1052 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 KLRC3Q07444 240 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 ACVR2BQ13705 512 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 TAF11Q15544 211 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 CNGA2Q16280 664 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 EDRF1Q3B7T1 1238 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 RNF43Q68DV7 783 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 DAAM2Q86T65 1068 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 FAM210AQ96ND0 272 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 CRNKL1Q9BZJ0 848 aaKnown RBP17.2■□□□□ 0.34
SCLT1-208ENST00000506368 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
SCLT1-208ENST00000506368 SMARCA1P28370 1054 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 CNGA1P29973 690 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 NFIXQ14938 502 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 DIXDC1Q155Q3 683 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 DPH5Q9H2P9 285 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 TXLNGQ9NUQ3 528 aa17.2■□□□□ 0.34
SCLT1-208ENST00000506368 hCG_1984214I3L0E3 225 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 ATP4AP20648 1035 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 PDE6BP35913 854 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 LETM2Q2VYF4 491 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 CCDC24Q8N4L8 307 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 ZNF713Q8N859 430 aaPredicted RBP17.19■□□□□ 0.34
SCLT1-208ENST00000506368 HPS3Q969F9 1004 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 TSC22D3Q99576 134 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 OSBPL1AQ9BXW6 950 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 AZI2Q9H6S1 392 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 NIP7Q9Y221 180 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCLT1-208ENST00000506368 NCANO14594 1321 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 ESYT2A0FGR8 921 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 LINGO3P0C6S8 592 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 ITGA4P13612 1032 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 GCLCP48506 637 aaPredicted RBP17.19■□□□□ 0.34
SCLT1-208ENST00000506368 PAPOLAP51003 745 aaKnown RBP17.19■□□□□ 0.34
SCLT1-208ENST00000506368 TMEM119Q4V9L6 283 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 FAM26FQ5R3K3 315 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 CWF19L1Q69YN2 538 aaKnown RBP17.19■□□□□ 0.34
SCLT1-208ENST00000506368 ZNF571Q7Z3V5 609 aaPredicted RBP17.19■□□□□ 0.34
SCLT1-208ENST00000506368 DYDC1Q8WWB3 177 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 DDX12PQ92771 950 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 PNMA5Q96PV4 448 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 MTMR9Q96QG7 549 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 SPZ1Q9BXG8 430 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 ADAM22Q9P0K1 906 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 KIAA1551Q9HCM1 1747 aa17.19■□□□□ 0.34
SCLT1-208ENST00000506368 SPDYE3A6NKU9 549 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 RASGRF2O14827 1237 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 GGPS1O95749 300 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 FGGP02679 453 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 KRT16P08779 473 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 RARGP13631 454 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 CHRNA3P32297 505 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 MAPK7Q13164 816 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 FRMD5Q7Z6J6 570 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 ERICH1Q86X53 443 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 GOPCQ9HD26 462 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 USP40Q9NVE5 1235 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 ABCF2Q9UG63 623 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 MAD2L2Q9UI95 211 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 UTRNP46939 3433 aa17.18■□□□□ 0.34
SCLT1-208ENST00000506368 EME2A4GXA9 379 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-208ENST00000506368 CETN3O15182 167 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 EVI5O60447 810 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 MMP10P09238 476 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 RAB27AP51159 221 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 SPATA21Q7Z572 469 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 ZNF34Q8IZ26 560 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 KLHL14Q9P2G3 628 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 PRKAG3Q9UGI9 489 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 KIAA0391O15091 583 aaKnown RBP17.17■□□□□ 0.34
SCLT1-208ENST00000506368 UNC5CO95185 931 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 BAG3O95817 575 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 SHBGP04278 402 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 UCHL3P15374 230 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 RPS6KA3P51812 740 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 COASYQ13057 564 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 SLC29A2Q14542 456 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 SLC5A9Q2M3M2 681 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 SPDYAQ5MJ70 313 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 TRMT10CQ7L0Y3 403 aaKnown RBP17.17■□□□□ 0.34
SCLT1-208ENST00000506368 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 CCDC65Q8IXS2 484 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 AGGF1Q8N302 714 aaeCLIP17.17■□□□□ 0.34
SCLT1-208ENST00000506368 PARD3BQ8TEW8 1205 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 RNF25Q96BH1 459 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-208ENST00000506368 SERPINB12Q96P63 405 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 TMEM237Q96Q45 408 aa17.17■□□□□ 0.34
SCLT1-208ENST00000506368 CELF4Q9BZC1 486 aaKnown RBP17.17■□□□□ 0.34
SCLT1-208ENST00000506368 DCP1AQ9NPI6 582 aaPredicted RBP17.17■□□□□ 0.34
SCLT1-208ENST00000506368 PAPOLBQ9NRJ5 636 aaKnown RBP17.17■□□□□ 0.34
SCLT1-208ENST00000506368 SYNGAP1Q96PV0 1343 aa17.16■□□□□ 0.34
SCLT1-208ENST00000506368 KDM3AQ9Y4C1 1321 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms