RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 CTNNAL1Q9UBT7 734 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 SERTM1A2A2V5 107 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 SIGLEC16A6NMB1 481 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 GNAT3A8MTJ3 354 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 GOLGA6L6A8MZA4 724 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 GOLGA6L22H0YM25 854 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 RNF113AO15541 343 aaKnown RBP2.51□□□□□ -2.01
NEDD4-205ENST00000506154 NEMFO60524 1076 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 IL2RBP14784 551 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 CPA3P15088 417 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 KRT24Q2M2I5 525 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 TRAPPC3LQ5T215 181 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 DUS1LQ6P1R4 473 aaKnown RBP2.51□□□□□ -2.01
NEDD4-205ENST00000506154 PGM2L1Q6PCE3 622 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 DNAAF4Q8WXU2 420 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 SCLT1Q96NL6 688 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 MOV10L1Q9BXT6 1211 aaKnown RBP2.51□□□□□ -2.01
NEDD4-205ENST00000506154 TRIM8Q9BZR9 551 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 SRA1Q9HD15 236 aaKnown RBP2.51□□□□□ -2.01
NEDD4-205ENST00000506154 ZNHIT2Q9UHR6 403 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 PPP1R9AQ9ULJ8 1098 aa2.51□□□□□ -2.01
NEDD4-205ENST00000506154 TCRBV5S4A2TA0A5A2 114 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 NDUFA2O43678 99 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 MSL3P1P0C860 447 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 XBP1P17861 261 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CES1P23141 567 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 EIF4A3P38919 411 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 DRP2Q13474 957 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GTDC1Q4AE62 458 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 RRAGBQ5VZM2 374 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 C8orf86Q6ZUL3 223 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CISD2Q8N5K1 135 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ATP11CQ8NB49 1132 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GABPB2Q8TAK5 448 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CDK5RAP3Q96JB5 506 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CABS1Q96KC9 395 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CFAP53Q96M91 514 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GBP4Q96PP9 640 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 TTC12Q9H892 705 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 C12orf10Q9HB07 376 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 RXFP1Q9HBX9 757 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 TYW1Q9NV66 732 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ITM2BQ9Y287 266 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 DOCK1Q14185 1865 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 TRIM77I1YAP6 450 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ENPP3O14638 875 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 KPNA5O15131 536 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 U2AF1L5P0DN76 240 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 HOXD12P35452 270 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 IL6STP40189 918 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 U2AF1Q01081 240 aaKnown RBP eCLIP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 PFKPQ01813 784 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ZNF827Q17R98 1081 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CYP4A22Q5TCH4 519 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 THEMIS2Q5TEJ8 643 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 MRM1Q6IN84 353 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CEP85Q6P2H3 762 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 NCCRP1Q6ZVX7 275 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 PEX5LQ8IYB4 626 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 LINS1Q8NG48 757 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 NKD1Q969G9 470 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 HGH1Q9BTY7 390 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 EPB41L1Q9H4G0 881 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 MAFFQ9ULX9 164 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 BHMG1C9JSJ3 638 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SLC26A4O43511 780 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SGTAO43765 313 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CIAO1O76071 339 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 IL33O95760 270 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 BAG3O95817 575 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SYF2O95926 243 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 DNM2P50570 870 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 TPM4P67936 248 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 NUCB1Q02818 461 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 DPYSQ14117 519 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 TTF1Q15361 905 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 Q4G0T1 1027 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CCDC70Q6NSX1 233 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 BEND5Q7L4P6 421 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CCDC150Q8NCX0 1101 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 DIS3LQ8TF46 1054 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 RIN2Q8WYP3 895 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ZBED2Q9BTP6 218 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SMARCAD1Q9H4L7 1026 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 VCPKMTQ9H867 229 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ZCCHC17Q9NP64 241 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 EPS15L1Q9UBC2 864 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 VPS9D1Q9Y2B5 631 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 BZW2Q9Y6E2 419 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CCDC88AQ3V6T2 1871 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ERICH4A6NGS2 130 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 CYP1A2P05177 515 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 VIMP08670 466 aaKnown RBP2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GZMAP12544 262 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 SDSP20132 328 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GNA15P30679 374 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GRIA4P48058 902 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 GHRHRQ02643 423 aa2.5□□□□□ -2.01
NEDD4-205ENST00000506154 ST3GAL1Q11201 340 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms