RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 ZNF668Q96K58 619 aaPredicted RBP27.81■■■□□ 2.04
HERC4-212ENST00000505760 PDRG1Q9NUG6 133 aa27.81■■■□□ 2.04
HERC4-212ENST00000505760 CYP3A7-CYP3A51PA0A087WV96 503 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 FGF18O76093 207 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 CYP3A7P24462 503 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 PLA2G5P39877 138 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 COLGALT1Q8NBJ5 622 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 AIFM3Q96NN9 605 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 POP1Q99575 1024 aaKnown RBP27.8■■■□□ 2.04
HERC4-212ENST00000505760 TLE6Q9H808 572 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 TLR9Q9NR96 1032 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 HCSTQ9UBK5 93 aa27.8■■■□□ 2.04
HERC4-212ENST00000505760 SEPT9Q9UHD8 586 aaPredicted RBP27.8■■■□□ 2.04
HERC4-212ENST00000505760 C19orf67A6NJJ6 358 aa27.79■■■□□ 2.04
HERC4-212ENST00000505760 M0R2N6 131 aa27.79■■■□□ 2.04
HERC4-212ENST00000505760 HOXA2O43364 376 aa27.79■■■□□ 2.04
HERC4-212ENST00000505760 DCXO43602 365 aa27.79■■■□□ 2.04
HERC4-212ENST00000505760 GPC3P51654 580 aa27.79■■■□□ 2.04
HERC4-212ENST00000505760 NONOQ15233 471 aaKnown RBP eCLIP27.79■■■□□ 2.043e-7■■■■□ 23.9
HERC4-212ENST00000505760 NLRP7Q8WX94 980 aa27.79■■■□□ 2.04
HERC4-212ENST00000505760 TMEM117Q9H0C3 514 aa27.79■■■□□ 2.04
HERC4-212ENST00000505760 PCDHGC5Q9Y5F6 944 aa27.79■■■□□ 2.04
HERC4-212ENST00000505760 LAG3P18627 525 aa27.78■■■□□ 2.04
HERC4-212ENST00000505760 MTERF2Q49AM1 385 aa27.78■■■□□ 2.04
HERC4-212ENST00000505760 XKR3Q5GH77 459 aa27.78■■■□□ 2.04
HERC4-212ENST00000505760 ABI1Q8IZP0 508 aa27.78■■■□□ 2.04
HERC4-212ENST00000505760 MSLNLQ96KJ4 702 aa27.78■■■□□ 2.04
HERC4-212ENST00000505760 TRIOO75962 3097 aa27.78■■■□□ 2.04
HERC4-212ENST00000505760 CDKL5O76039 1030 aa27.77■■■□□ 2.04
HERC4-212ENST00000505760 DARSP14868 501 aaKnown RBP27.77■■■□□ 2.04
HERC4-212ENST00000505760 TARBP2Q15633 366 aaKnown RBP27.77■■■□□ 2.04
HERC4-212ENST00000505760 NPY5RQ15761 445 aa27.77■■■□□ 2.04
HERC4-212ENST00000505760 MOXD1Q6UVY6 613 aa27.77■■■□□ 2.04
HERC4-212ENST00000505760 KRT25Q7Z3Z0 450 aa27.77■■■□□ 2.04
HERC4-212ENST00000505760 RNF169Q8NCN4 708 aa27.77■■■□□ 2.04
HERC4-212ENST00000505760 ETNPPLQ8TBG4 499 aa27.77■■■□□ 2.04
HERC4-212ENST00000505760 NIFKQ9BYG3 293 aaKnown RBP27.77■■■□□ 2.04
HERC4-212ENST00000505760 CWH43Q9H720 699 aa27.77■■■□□ 2.04
HERC4-212ENST00000505760 DDX25Q9UHL0 483 aaKnown RBP27.77■■■□□ 2.04
HERC4-212ENST00000505760 PRR33A8MZF0 331 aa27.76■■■□□ 2.03
HERC4-212ENST00000505760 DNM2P50570 870 aa27.76■■■□□ 2.03
HERC4-212ENST00000505760 INF2Q27J81 1249 aa27.76■■■□□ 2.03
HERC4-212ENST00000505760 ECHDC2Q86YB7 292 aa27.76■■■□□ 2.03
HERC4-212ENST00000505760 MBOAT7Q96N66 472 aa27.76■■■□□ 2.03
HERC4-212ENST00000505760 CASD1Q96PB1 797 aa27.76■■■□□ 2.03
HERC4-212ENST00000505760 CLEC1BQ9P126 229 aa27.76■■■□□ 2.03
HERC4-212ENST00000505760 KCNJ14Q9UNX9 436 aa27.76■■■□□ 2.03
HERC4-212ENST00000505760 EYA4O95677 639 aa27.75■■■□□ 2.03
HERC4-212ENST00000505760 NEFLP07196 543 aa27.75■■■□□ 2.03
HERC4-212ENST00000505760 FGFR4P22455 802 aa27.75■■■□□ 2.03
HERC4-212ENST00000505760 CDC42EP1Q00587 391 aa27.75■■■□□ 2.03
HERC4-212ENST00000505760 LETM2Q2VYF4 491 aa27.75■■■□□ 2.03
HERC4-212ENST00000505760 PDE12Q6L8Q7 609 aaKnown RBP27.75■■■□□ 2.03
HERC4-212ENST00000505760 B3GNT9Q6UX72 402 aa27.75■■■□□ 2.03
HERC4-212ENST00000505760 LRRC43Q8N309 656 aa27.75■■■□□ 2.03
HERC4-212ENST00000505760 GCOM2Q9BZD3 368 aaPredicted RBP27.75■■■□□ 2.03
HERC4-212ENST00000505760 BARX2Q9UMQ3 279 aaPredicted RBP27.75■■■□□ 2.03
HERC4-212ENST00000505760 ARIH1Q9Y4X5 557 aaPredicted RBP27.75■■■□□ 2.03
HERC4-212ENST00000505760 CCDC194A0A1B0GVG4 234 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 TMEM150BA6NC51 233 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 DDX11L8A8MPP1 907 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 PER2O15055 1255 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 ERVFC1P60507 584 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 COASYQ13057 564 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 DRP2Q13474 957 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 SMRP1Q8NCR6 262 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 SH2D3AQ9BRG2 576 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 SLKQ9H2G2 1235 aaPredicted RBP27.74■■■□□ 2.03
HERC4-212ENST00000505760 RNF19AQ9NV58 838 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 DACT1Q9NYF0 836 aa27.74■■■□□ 2.03
HERC4-212ENST00000505760 PUF60Q9UHX1 559 aaKnown RBP27.74■■■□□ 2.03
HERC4-212ENST00000505760 FSD2A1L4K1 749 aa27.73■■■□□ 2.03
HERC4-212ENST00000505760 CSDE1O75534 798 aaKnown RBP27.73■■■□□ 2.03
HERC4-212ENST00000505760 GLP2RO95838 553 aa27.73■■■□□ 2.03
HERC4-212ENST00000505760 XBP1P17861 261 aa27.73■■■□□ 2.03
HERC4-212ENST00000505760 SCRN1Q12765 414 aa27.73■■■□□ 2.03
HERC4-212ENST00000505760 LRRC55Q6ZSA7 311 aa27.73■■■□□ 2.03
HERC4-212ENST00000505760 ZNF558Q96NG5 402 aa27.73■■■□□ 2.03
HERC4-212ENST00000505760 CDCA3Q99618 268 aaPredicted RBP27.73■■■□□ 2.03
HERC4-212ENST00000505760 LZTS1Q9Y250 596 aa27.73■■■□□ 2.03
HERC4-212ENST00000505760 A0A0U1RQF3 1178 aa27.72■■■□□ 2.03
HERC4-212ENST00000505760 SLC37A4O43826 429 aa27.72■■■□□ 2.03
HERC4-212ENST00000505760 STBD1O95210 358 aa27.72■■■□□ 2.03
HERC4-212ENST00000505760 PPM1AP35813 382 aa27.72■■■□□ 2.03
HERC4-212ENST00000505760 PSMC5P62195 406 aa27.72■■■□□ 2.03
HERC4-212ENST00000505760 PLCB3Q01970 1234 aa27.72■■■□□ 2.03
HERC4-212ENST00000505760 KCNT2Q6UVM3 1135 aa27.72■■■□□ 2.03
HERC4-212ENST00000505760 MRPS27Q92552 414 aaKnown RBP27.72■■■□□ 2.03
HERC4-212ENST00000505760 PHF20Q9BVI0 1012 aa27.72■■■□□ 2.03
HERC4-212ENST00000505760 IGKV6-21A0A0C4DH24 114 aa27.71■■■□□ 2.03
HERC4-212ENST00000505760 EOMESO95936 686 aa27.71■■■□□ 2.03
HERC4-212ENST00000505760 KRT17Q04695 432 aa27.71■■■□□ 2.03
HERC4-212ENST00000505760 DUSP6Q16828 381 aa27.71■■■□□ 2.03
HERC4-212ENST00000505760 PLPP4Q5VZY2 271 aa27.71■■■□□ 2.03
HERC4-212ENST00000505760 CEP89Q96ST8 783 aa27.71■■■□□ 2.03
HERC4-212ENST00000505760 ENTPD7Q9NQZ7 604 aa27.71■■■□□ 2.03
HERC4-212ENST00000505760 SUCLA2Q9P2R7 463 aaPredicted RBP27.71■■■□□ 2.03
HERC4-212ENST00000505760 STK36Q9NRP7 1315 aa27.7■■■□□ 2.03
HERC4-212ENST00000505760 A0A087WZ62 844 aa27.7■■■□□ 2.02
HERC4-212ENST00000505760 FSCN2O14926 492 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms