RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 RPS6KA1Q15418 735 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 PARP6Q2NL67 630 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 TSNAXIP1Q2TAA8 658 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
LETM1-203ENST00000505551 GPIHBP1Q8IV16 184 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 IQCF2Q8IXL9 164 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 MAGEB6P1A0A0J9YX57 407 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 PGRMC1O00264 195 aaKnown RBP14.36□□□□□ -0.11
LETM1-203ENST00000505551 AGTP01019 485 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 USP11P51784 963 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 COL23A1Q86Y22 540 aaPredicted RBP14.36□□□□□ -0.11
LETM1-203ENST00000505551 TRIM42Q8IWZ5 723 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 ZNF654Q8IZM8 581 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 ZNF384Q8TF68 577 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 DMAP1Q9NPF5 467 aaPredicted RBP14.36□□□□□ -0.11
LETM1-203ENST00000505551 DNAAF2Q9NVR5 837 aaKnown RBP14.36□□□□□ -0.11
LETM1-203ENST00000505551 ATP8A1Q9Y2Q0 1164 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 ARL2BPQ9Y2Y0 163 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 PNPLA7Q6ZV29 1317 aa14.36□□□□□ -0.11
LETM1-203ENST00000505551 PRDX5P30044 214 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 CNGA2Q16280 664 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 ARL6IP4Q66PJ3 421 aaKnown RBP14.35□□□□□ -0.11
LETM1-203ENST00000505551 DPY19L2Q6NUT2 758 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 ARHGAP27Q6ZUM4 889 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 NEK9Q8TD19 979 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 DNAJC9Q8WXX5 260 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 ANKS1AQ92625 1134 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 AGAP3Q96P47 875 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 TRIM7Q9C029 511 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 NYXQ9GZU5 481 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 MMRN2Q9H8L6 949 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 PRKAG3Q9UGI9 489 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 PENKP01210 267 aaPredicted RBP14.35□□□□□ -0.11
LETM1-203ENST00000505551 IFNAR2P48551 515 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 TRAPPC10P48553 1259 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 IFI35P80217 286 aaPredicted RBP14.35□□□□□ -0.11
LETM1-203ENST00000505551 UBE4AQ14139 1066 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 ATP8B4Q8TF62 1192 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 FMO2Q99518 471 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.35□□□□□ -0.11
LETM1-203ENST00000505551 AP1M1Q9BXS5 423 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 AZI2Q9H6S1 392 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 KBTBD4Q9NVX7 518 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 AMACRQ9UHK6 382 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 NOC2LQ9Y3T9 749 aaKnown RBP14.35□□□□□ -0.11
LETM1-203ENST00000505551 CEP104O60308 925 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 UNC5CO95185 931 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 FUT2Q10981 343 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 TDRD12Q587J7 1177 aaKnown RBP14.35□□□□□ -0.11
LETM1-203ENST00000505551 TNFAIP8L3Q5GJ75 292 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 RC3H1Q5TC82 1133 aaKnown RBP14.35□□□□□ -0.11
LETM1-203ENST00000505551 PIGOQ8TEQ8 1089 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 AZIN2Q96A70 460 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 FGFR1OP2Q9NVK5 253 aa14.35□□□□□ -0.11
LETM1-203ENST00000505551 BTNL10A8MVZ5 291 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 RGS16O15492 202 aaPredicted RBP14.34□□□□□ -0.11
LETM1-203ENST00000505551 TTI1O43156 1089 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 HIBADHP31937 336 aaKnown RBP14.34□□□□□ -0.11
LETM1-203ENST00000505551 CA8P35219 290 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 PPP1R2P41236 205 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 SLC9C1Q4G0N8 1177 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 KIAA0825Q8IV33 1275 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 SYN2Q92777 582 aaPredicted RBP14.34□□□□□ -0.11
LETM1-203ENST00000505551 PABPC3Q9H361 631 aaKnown RBP14.34□□□□□ -0.11
LETM1-203ENST00000505551 MMADHCQ9H3L0 296 aaPredicted RBP14.34□□□□□ -0.11
LETM1-203ENST00000505551 ATXN10Q9UBB4 475 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 ABCB11O95342 1321 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 COL1A1P02452 1464 aaPredicted RBP14.34□□□□□ -0.11
LETM1-203ENST00000505551 hCG_1642624A0A1W2PR95 340 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 PRPF3O43395 683 aaKnown RBP14.34□□□□□ -0.11
LETM1-203ENST00000505551 TLR2O60603 784 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 SERPING1P05155 500 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 RXRBP28702 533 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 TM4SF1P30408 202 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 MAN2A1Q16706 1144 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 SLC10A5Q5PT55 438 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 CACTIN-AS1Q8N1I8 211 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 SLC17A8Q8NDX2 589 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 SH3TC2Q8TF17 1288 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
LETM1-203ENST00000505551 RBM17Q96I25 401 aaKnown RBP14.34□□□□□ -0.11
LETM1-203ENST00000505551 GM2AP17900 193 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 MAGEA10P43363 369 aaPredicted RBP14.33□□□□□ -0.12
LETM1-203ENST00000505551 PTDSS1P48651 473 aaKnown RBP14.33□□□□□ -0.12
LETM1-203ENST00000505551 POU5F1Q01860 360 aaKnown RBP14.33□□□□□ -0.12
LETM1-203ENST00000505551 PPP2R5BQ15173 497 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 CERKQ8TCT0 537 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 UCMAQ8WVF2 138 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 TMEM109Q9BVC6 243 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 TIPINQ9BVW5 301 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 FAM192AQ9GZU8 254 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 ZMYND12Q9H0C1 365 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 LRMDAQ9H2I8 198 aa14.33□□□□□ -0.12
LETM1-203ENST00000505551 OCEL1Q9H607 264 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms