RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 PER2O15055 1255 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 DEXIO95424 95 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 FGFR4P22455 802 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.21
SNHG4-202ENST00000505522 CYP3A7P24462 503 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 GPC3P51654 580 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 JAK3P52333 1124 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 RBM10P98175 930 aaKnown RBP13.77□□□□□ -0.21
SNHG4-202ENST00000505522 UBE3AQ05086 875 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 STK3Q13188 491 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 TARBP2Q15633 366 aaKnown RBP13.77□□□□□ -0.21
SNHG4-202ENST00000505522 NPY5RQ15761 445 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 MIER3Q7Z3K6 550 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 BLIDQ8IZY5 108 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 SMRP1Q8NCR6 262 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 ZNF274Q96GC6 653 aaPredicted RBP13.77□□□□□ -0.21
SNHG4-202ENST00000505522 CASD1Q96PB1 797 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
SNHG4-202ENST00000505522 TMEM117Q9H0C3 514 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 TLE6Q9H808 572 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 TLR9Q9NR96 1032 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 CPLX1O14810 134 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 FSCN2O14926 492 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 EPB41L2O43491 1005 aaKnown RBP13.76□□□□□ -0.21
SNHG4-202ENST00000505522 CSDE1O75534 798 aaKnown RBP13.76□□□□□ -0.21
SNHG4-202ENST00000505522 STBD1O95210 358 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 DARSP14868 501 aaKnown RBP13.76□□□□□ -0.21
SNHG4-202ENST00000505522 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 COASYQ13057 564 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 DRP2Q13474 957 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 B3GNT9Q6UX72 402 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 ECHDC2Q86YB7 292 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 DAGLBQ8NCG7 672 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 VN1R2Q8NFZ6 395 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 ETNPPLQ8TBG4 499 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 MBOAT7Q96N66 472 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 CEP89Q96ST8 783 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 POP1Q99575 1024 aaKnown RBP13.76□□□□□ -0.21
SNHG4-202ENST00000505522 C22orf23Q9BZE7 217 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 TM6SF1Q9BZW5 370 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 SEPT9Q9UHD8 586 aaPredicted RBP13.76□□□□□ -0.21
SNHG4-202ENST00000505522 MUTYHQ9UIF7 546 aa13.76□□□□□ -0.21
SNHG4-202ENST00000505522 TRIOO75962 3097 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 ZSCAN20P17040 1043 aaPredicted RBP13.75□□□□□ -0.21
SNHG4-202ENST00000505522 LAG3P18627 525 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 PBX3P40426 434 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 MTERF2Q49AM1 385 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 CLLU1OSQ5K130 101 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 RNF135Q8IUD6 432 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 ZNF710Q8N1W2 664 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 RDM1Q8NG50 284 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 SCLT1Q96NL6 688 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 SH2D3AQ9BRG2 576 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 NIFKQ9BYG3 293 aaKnown RBP13.75□□□□□ -0.21
SNHG4-202ENST00000505522 KCNJ14Q9UNX9 436 aa13.75□□□□□ -0.21
SNHG4-202ENST00000505522 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 HOXA2O43364 376 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 DTNBO60941 627 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 ATF7P17544 494 aaPredicted RBP13.74□□□□□ -0.21
SNHG4-202ENST00000505522 PLCB3Q01970 1234 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 DUSP6Q16828 381 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 INF2Q27J81 1249 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 XKR3Q5GH77 459 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 PLPP4Q5VZY2 271 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 KCNT2Q6UVM3 1135 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 LRRC43Q8N309 656 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 RNF169Q8NCN4 708 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
SNHG4-202ENST00000505522 PDRG1Q9NUG6 133 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 DDX25Q9UHL0 483 aaKnown RBP13.74□□□□□ -0.21
SNHG4-202ENST00000505522 LZTS1Q9Y250 596 aa13.74□□□□□ -0.21
SNHG4-202ENST00000505522 USP15Q9Y4E8 981 aaPredicted RBP13.74□□□□□ -0.21
SNHG4-202ENST00000505522 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 SLC37A4O43826 429 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
SNHG4-202ENST00000505522 NONOQ15233 471 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNHG4-202ENST00000505522 HERC4Q5GLZ8 1057 aaPredicted RBP13.73□□□□□ -0.21
SNHG4-202ENST00000505522 GALNT17Q6IS24 598 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
SNHG4-202ENST00000505522 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 ANO5Q75V66 913 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 ZNF598Q86UK7 904 aaKnown RBP13.73□□□□□ -0.21
SNHG4-202ENST00000505522 ABI1Q8IZP0 508 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 HELQQ8TDG4 1101 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 ZNF558Q96NG5 402 aa13.73□□□□□ -0.21
SNHG4-202ENST00000505522 A0A087WZ62 844 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 HIDE1A8MVS5 230 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 LOC730098B7Z3J9 87 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 EML1O00423 815 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 MAFO75444 373 aaPredicted RBP13.72□□□□□ -0.21
SNHG4-202ENST00000505522 EOMESO95936 686 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 SCRN1Q12765 414 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 KCNC3Q14003 757 aa13.72□□□□□ -0.21
SNHG4-202ENST00000505522 LETM2Q2VYF4 491 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms