RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PPM1BO75688 479 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 RNF144AP50876 292 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 NLRP5P59047 1200 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 C19orf57Q0VDD7 668 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 BLMHQ13867 455 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 HSF5Q4G112 596 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 SLC35F1Q5T1Q4 408 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 ZNF619Q8N2I2 560 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 GOT1L1Q8NHS2 421 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 ERCC4Q92889 916 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 MVB12AQ96EY5 273 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 TMEM237Q96Q45 408 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 ANO3Q9BYT9 981 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 AGXT2Q9BYV1 514 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 TSPY26PQ9H489 355 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 LIMCH1Q9UPQ0 1083 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 HIF3AQ9Y2N7 669 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 H7C0S8 307 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 MAN1A2O60476 641 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ULK1O75385 1050 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 URI1O94763 535 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 SOX18P35713 384 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 SESN3P58005 492 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ZNF445P59923 1031 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 MRPL28Q13084 256 aaKnown RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 IKBKEQ14164 716 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 STARD3Q14849 445 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 BBS9Q3SYG4 887 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 CT83Q5H943 113 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 MAP3K21Q5TCX8 1036 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 STYK1Q6J9G0 422 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 POMZP3Q6PJE2 187 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 CHD1LQ86WJ1 897 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ZNF540Q8NDQ6 660 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 CNTD2Q9H8S5 307 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ZMAT3Q9HA38 289 aaKnown RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 COQ3Q9NZJ6 369 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 NAGPAQ9UK23 515 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 CBLCQ9ULV8 474 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 A0A1B0GTH6 734 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 CCDC66A2RUB6 948 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 MAFKO60675 156 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 TPPPO94811 219 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 STARD3NLO95772 234 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 HARSP12081 509 aaKnown RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 PTPRAP18433 802 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 MX2P20592 715 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 MAOBP27338 520 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 PAPOLAP51003 745 aaKnown RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 LIMK1P53667 647 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 SCARB2Q14108 478 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ZBTB8BQ8NAP8 495 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 HS3ST6Q96QI5 342 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ELF4Q99607 663 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 KCNJ15Q99712 375 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 GP6Q9HCN6 339 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 STARD7Q9NQZ5 370 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ORC3Q9UBD5 711 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-204ENST00000504430 MKL2Q9ULH7 1088 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 ITM2BQ9Y287 266 aa5.88□□□□□ -1.47
NIPBL-204ENST00000504430 TNFRSF6BO95407 300 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 LPLP06858 475 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 DESP17661 470 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 ACSL1P33121 698 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 DPP6P42658 865 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 POLD2P49005 469 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 IFI35P80217 286 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 PFKFB4Q16877 469 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 CPZQ66K79 652 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 LHX8Q68G74 356 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 PPIL6Q8IXY8 311 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 MEIOBQ8N635 442 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 FERMT2Q96AC1 680 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 ZUFSPQ96AP4 578 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 OTUD5Q96G74 571 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 CGRRF1Q99675 332 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 B4GALT6Q9UBX8 382 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 NR2E3Q9Y5X4 410 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 EPN1Q9Y6I3 576 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 LGALS16A8MUM7 142 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 ZBED4O75132 1171 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 GSNP06396 782 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 PORP16435 677 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 RPL17P18621 184 aaKnown RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 DMTNQ08495 405 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 RASA2Q15283 850 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 TSTQ16762 297 aaKnown RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 NOL9Q5SY16 702 aaKnown RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 IZUMO3Q5VZ72 239 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 DENND5BQ6ZUT9 1274 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 MAMDC2Q7Z304 686 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 ANKRD35Q8N283 1001 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 DHRS1Q96LJ7 313 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 UNC45AQ9H3U1 944 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 PRDM12Q9H4Q4 367 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 NOC2LQ9Y3T9 749 aaKnown RBP5.87□□□□□ -1.47
NIPBL-204ENST00000504430 LRRC14BA6NHZ5 514 aa5.87□□□□□ -1.47
NIPBL-204ENST00000504430 CYP17A1P05093 508 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms