RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 TGFB3P10600 412 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 KRT13P13646 458 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 UCHL3P15374 230 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 KCNA2P16389 499 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 FERP16591 822 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 MCM3P25205 808 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 PON1P27169 355 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 MAGEA1P43355 309 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 CHMP4BP1P59074 171 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 ELF2Q15723 593 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 STXBP2Q15833 593 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 ASIC2Q16515 512 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 SLC18A3Q16572 532 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 IFI16Q16666 785 aaKnown RBP10.72□□□□□ -0.69
COL1A1-210ENST00000504289 ERCC6LQ2NKX8 1250 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 IQCEQ6IPM2 695 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.72□□□□□ -0.69
COL1A1-210ENST00000504289 USP37Q86T82 979 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 CTAGE6Q86UF2 777 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 ERO1BQ86YB8 467 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 CTAGE4Q8IX94 777 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 SYCP3Q8IZU3 236 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 CALR3Q96L12 384 aaKnown RBP10.72□□□□□ -0.69
COL1A1-210ENST00000504289 IRX2Q9BZI1 471 aaPredicted RBP10.72□□□□□ -0.69
COL1A1-210ENST00000504289 A1CFQ9NQ94 594 aaKnown RBP10.72□□□□□ -0.69
COL1A1-210ENST00000504289 RNF14Q9UBS8 474 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 INTUQ9ULD6 942 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 SAR1BQ9Y6B6 198 aa10.72□□□□□ -0.69
COL1A1-210ENST00000504289 A0A0G2JLL6 359 aaPredicted RBP10.71□□□□□ -0.69
COL1A1-210ENST00000504289 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 K7ENM7 598 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 ZNF263O14978 683 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 ZBTB39O15060 712 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 KIAA0391O15091 583 aaKnown RBP10.71□□□□□ -0.69
COL1A1-210ENST00000504289 ATP9AO75110 1047 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 DGAT1O75907 488 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 ATG7O95352 703 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 SLC25A27O95847 323 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 CCNE2O96020 404 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 COL11A1P12107 1806 aaPredicted RBP10.71□□□□□ -0.69
COL1A1-210ENST00000504289 FMO5P49326 533 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 JAM2P57087 298 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 KLHL30Q0D2K2 578 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 VGLL4Q14135 290 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 BRD3Q15059 726 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 XKR3Q5GH77 459 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 MIS18BP1Q6P0N0 1132 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 KCNV1Q6PIU1 500 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 HAUS6Q7Z4H7 955 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 PRRT2Q7Z6L0 340 aaPredicted RBP10.71□□□□□ -0.69
COL1A1-210ENST00000504289 ANKRD13AQ8IZ07 590 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 GTF3C2Q8WUA4 911 aaPredicted RBP10.71□□□□□ -0.69
COL1A1-210ENST00000504289 RUBCNQ92622 972 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 NOX5Q96PH1 765 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 SPAG5Q96R06 1193 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 STK33Q9BYT3 514 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 JPH1Q9HDC5 661 aaPredicted RBP10.71□□□□□ -0.69
COL1A1-210ENST00000504289 OGFRQ9NZT2 677 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 SLC9A2Q9UBY0 812 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 SCAF8Q9UPN6 1271 aaKnown RBP10.71□□□□□ -0.69
COL1A1-210ENST00000504289 KCNH4Q9UQ05 1017 aa10.71□□□□□ -0.69
COL1A1-210ENST00000504289 PAPPA2Q9BXP8 1791 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 A0A0G2JMZ2 1700 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 CCDC151A5D8V7 595 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 SPDYE5A6NIY4 337 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 DDX39AO00148 427 aaKnown RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 TLR2O60603 784 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 EXOC3O60645 756 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 RGS20O76081 388 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 TCP1P17987 556 aaKnown RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 EDNRBP24530 442 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 GTF2H1P32780 548 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 STAT1P42224 750 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 CASP4P49662 377 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 BFSP1Q12934 665 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 DMP1Q13316 513 aaPredicted RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 RAPGEF1Q13905 1077 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 BMS1Q14692 1282 aaKnown RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 ZC2HC1CQ53FD0 456 aaPredicted RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 TDRD12Q587J7 1177 aaKnown RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 XKR9Q5GH70 373 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 TCERG1LQ5VWI1 586 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 DPY19L2Q6NUT2 758 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 ABHD15Q6UXT9 468 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 FASTKD5Q7L8L6 764 aaKnown RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 ZNF572Q7Z3I7 529 aaPredicted RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 IRF2BP2Q7Z5L9 587 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 MAP4K3Q8IVH8 894 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 EXOC8Q8IYI6 725 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 XXYLT1Q8NBI6 393 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 MSANTD4Q8NCY6 345 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 HNRNPLLQ8WVV9 542 aaKnown RBP10.7□□□□□ -0.7
COL1A1-210ENST00000504289 WNK4Q96J92 1243 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 FAM81BQ96LP2 452 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 LACRTQ9GZZ8 138 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 NLRC4Q9NPP4 1024 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 PDLIM7Q9NR12 457 aa10.7□□□□□ -0.7
COL1A1-210ENST00000504289 IGSF9BQ9UPX0 1349 aa10.69□□□□□ -0.7
COL1A1-210ENST00000504289 POLR2AP24928 1970 aaKnown RBP10.69□□□□□ -0.7
COL1A1-210ENST00000504289 PTPRFP10586 1907 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms