RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 KLHL29Q96CT2 875 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 TRIM11Q96F44 468 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 XPO6Q96QU8 1125 aaKnown RBP3.81□□□□□ -1.8
PCAT4-201ENST00000504263 LRRC1Q9BTT6 524 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 RTFDC1Q9BY42 306 aaPredicted RBP3.81□□□□□ -1.8
PCAT4-201ENST00000504263 SYNCQ9H7C4 482 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 DCLRE1BQ9H816 532 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 CLK4Q9HAZ1 481 aaKnown RBP3.81□□□□□ -1.8
PCAT4-201ENST00000504263 ARHGEF10LQ9HCE6 1279 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 ABHD10Q9NUJ1 306 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 TMOD3Q9NYL9 352 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 STOML1Q9UBI4 398 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 HERC5Q9UII4 1024 aaKnown RBP3.81□□□□□ -1.8
PCAT4-201ENST00000504263 TTC7AQ9ULT0 858 aaPredicted RBP3.81□□□□□ -1.8
PCAT4-201ENST00000504263 SNX12Q9UMY4 172 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 AGAP1Q9UPQ3 857 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 SSX2IPQ9Y2D8 614 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 LUC7L2Q9Y383 392 aaKnown RBP3.81□□□□□ -1.8
PCAT4-201ENST00000504263 FAM32AQ9Y421 112 aaKnown RBP3.81□□□□□ -1.8
PCAT4-201ENST00000504263 N6AMT1Q9Y5N5 214 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 SLC30A1Q9Y6M5 507 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 NUMBLQ9Y6R0 609 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 RFX7Q2KHR2 1363 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 LY75O60449 1722 aa3.81□□□□□ -1.8
PCAT4-201ENST00000504263 NCAPD2Q15021 1401 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 GRID2IPA4D2P6 1211 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 UNCXA6NJT0 531 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 ERVV-2B6SEH9 535 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 LSM1O15116 133 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SART1O43290 800 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 DIAPH1O60610 1272 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 PEX11AO75192 247 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SUPT3HO75486 399 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 BBOX1O75936 387 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 GJB6O95452 261 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 ASMTLO95671 621 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 GYPCP04921 128 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 KRT16P08779 473 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 CPA1P15085 419 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 PHKG2P15735 406 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 PFKFB1P16118 471 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 EIF2S2P20042 333 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 PDE6BP35913 854 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SYKP43405 635 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 RAD23BP54727 409 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 CSE1LP55060 971 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 ADARP55265 1226 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 EIF3BP55884 814 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 RPL26P61254 145 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 ERVK-24P63145 666 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 PTH1RQ03431 593 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 PPIDQ08752 370 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 ITGA7Q13683 1181 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 CYLC2Q14093 348 aaPredicted RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SAFBQ15424 915 aaKnown RBP eCLIP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 NDUFA5Q16718 116 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 ZNF827Q17R98 1081 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 DEPDC1Q5TB30 811 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 RASIP1Q5U651 963 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 CDKAL1Q5VV42 579 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 CCDC102BQ68D86 513 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SULT6B1Q6IMI4 303 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 DUS1LQ6P1R4 473 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 HOOK3Q86VS8 718 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 DZIP1Q86YF9 867 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 RAB11FIP4Q86YS3 637 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SCUBE1Q8IWY4 988 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 GSPT2Q8IYD1 628 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 FBXL16Q8N461 479 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SPATA20Q8TB22 786 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 CAGE1Q8TC20 777 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SSH3Q8TE77 659 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 AIDAQ96BJ3 306 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 VPS50Q96JG6 964 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 NEK1Q96PY6 1258 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 AGXT2Q9BYV1 514 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 DPH5Q9H2P9 285 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 THAP9Q9H5L6 903 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 TMEM134Q9H6X4 195 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 ECT2Q9H8V3 914 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 JADE2Q9NQC1 790 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 RHBDL2Q9NX52 303 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SAMD15Q9P1V8 674 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 ZNHIT2Q9UHR6 403 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 USP20Q9Y2K6 914 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 NFE2L3Q9Y4A8 694 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 RBM8AQ9Y5S9 174 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 IGSF1Q8N6C5 1336 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 CNTNAP5Q8WYK1 1306 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 A0A0U1RQJ8 604 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 TBKBP1A7MCY6 615 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 TTC34A8MYJ7 566 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 E9PBE3 544 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 TRAFD1O14545 582 aaPredicted RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 NVLO15381 856 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SIAH2O43255 324 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 HNRNPRO43390 633 aaKnown RBP3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SNX3O60493 162 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 SERPINB7O75635 380 aa3.8□□□□□ -1.8
PCAT4-201ENST00000504263 UBOX5O94941 541 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms