RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 DSTYKQ6XUX3 929 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 SLC44A5Q8NCS7 719 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 POTEB3A0JP26 581 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 POTECB2RU33 542 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 P4HBP07237 508 aaKnown RBP17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 POTEBQ6S5H4 581 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 CATSPER4Q7RTX7 472 aa17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 NGRNQ9NPE2 291 aaKnown RBP17.71■□□□□ 0.43
PCDHA1-203ENST00000504120 CASP2P42575 452 aa17.71■□□□□ 0.42
PCDHA1-203ENST00000504120 TSTA3Q13630 321 aaPredicted RBP17.71■□□□□ 0.42
PCDHA1-203ENST00000504120 DHX38Q92620 1227 aaKnown RBP17.71■□□□□ 0.42
PCDHA1-203ENST00000504120 PPWD1Q96BP3 646 aaKnown RBP17.71■□□□□ 0.42
PCDHA1-203ENST00000504120 FAF2Q96CS3 445 aa17.71■□□□□ 0.42
PCDHA1-203ENST00000504120 PPP1R16BQ96T49 567 aa17.71■□□□□ 0.42
PCDHA1-203ENST00000504120 TDRD3Q9H7E2 651 aaKnown RBP17.71■□□□□ 0.42
PCDHA1-203ENST00000504120 C21orf2O43822 256 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 GFPT1Q06210 699 aaPredicted RBP17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 NAALADL2Q58DX5 795 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 ZNF449Q6P9G9 518 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 TMEM260Q9NX78 707 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 MAPK13O15264 365 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 ATP2C1P98194 919 aaPredicted RBP17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 MAGED2Q9UNF1 606 aaPredicted RBP17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 SNX24Q9Y343 169 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 GRID2IPA4D2P6 1211 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 ECE2O60344 883 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 NR1H3Q13133 447 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 SLC10A4Q96EP9 437 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 SAYSD1Q9NPB0 183 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 TOPORSQ9NS56 1045 aaPredicted RBP17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 ASNSD1Q9NWL6 643 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 DONSONQ9NYP3 566 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 A0A1W2PQC6 194 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 CDO1Q16878 200 aa17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 RAVER2Q9HCJ3 691 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-203ENST00000504120 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 CLGNO14967 610 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 TBXAS1P24557 533 aaPredicted RBP17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 PHKA2P46019 1235 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 QARSP47897 775 aaKnown RBP17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 USP11P51784 963 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 KLC3Q6P597 504 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 SRGAP2O75044 1071 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 VAMP7P51809 220 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 SPARCL1Q14515 664 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 NEDD1Q8NHV4 660 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 ESRRAP11474 423 aaPredicted RBP17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 ZNF699Q32M78 642 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 NUGGCQ68CJ6 796 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 DHX40Q8IX18 779 aaKnown RBP17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 ADGRG1Q9Y653 693 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 SLC16A4O15374 487 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 QRICH1Q2TAL8 776 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 SHC4Q6S5L8 630 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 ADGRF4Q8IZF3 695 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 PIM2Q9P1W9 311 aa17.69■□□□□ 0.42
PCDHA1-203ENST00000504120 OVOS2A0A0G2JMS6 1433 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 WDR91A4D1P6 747 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 STMN1P16949 149 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 ARPP19P56211 112 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 CC2D1AQ6P1N0 951 aaPredicted RBP17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 MORC4Q8TE76 937 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 VPS39Q96JC1 886 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 SERPINI1Q99574 410 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 DRC3Q9H069 523 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 FGFR1OP2Q9NVK5 253 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 NOC2LQ9Y3T9 749 aaKnown RBP17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 PDE1CQ14123 709 aaPredicted RBP17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 RABL6Q3YEC7 729 aaPredicted RBP17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 TTC25Q96NG3 672 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 DENND3A2RUS2 1198 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 CIITAP33076 1130 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 SNRNP48Q6IEG0 339 aaKnown RBP17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 FAM213AQ9BRX8 229 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 FAM49AQ9H0Q0 323 aaPredicted RBP17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 DNAJC17Q9NVM6 304 aaKnown RBP17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 F5H6K3 240 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 GNGT2O14610 69 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 DCTN3O75935 186 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 KLRC3Q07444 240 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 ART3Q13508 389 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 KCNB1Q14721 858 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 TMEM270Q6UE05 265 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 MTRQ99707 1265 aa17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 INTS2Q9H0H0 1204 aaKnown RBP17.68■□□□□ 0.42
PCDHA1-203ENST00000504120 SLC27A3Q5K4L6 730 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 OSBPL9Q96SU4 736 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 PITPNM3Q9BZ71 974 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 EDEM3Q9BZQ6 932 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 KIF9Q9HAQ2 790 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 UBN1Q9NPG3 1134 aa17.67■□□□□ 0.42
PCDHA1-203ENST00000504120 USP42Q9H9J4 1324 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms