RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 UBA1P22314 1058 aaKnown RBP4.25□□□□□ -1.73
USP46-205ENST00000504078 AVPR2P30518 371 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 HAND2P61296 217 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 PTPN11Q06124 597 aaPredicted RBP4.25□□□□□ -1.73
USP46-205ENST00000504078 RBL2Q08999 1139 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 SIGLEC14Q08ET2 396 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 APOBRQ0VD83 1088 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 CAMK1Q14012 370 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 BTG3Q14201 252 aaPredicted RBP4.25□□□□□ -1.73
USP46-205ENST00000504078 COL19A1Q14993 1142 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 CDC37Q16543 378 aaPredicted RBP4.25□□□□□ -1.73
USP46-205ENST00000504078 DGKDQ16760 1214 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 HSDL1Q3SXM5 330 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 PLEKHG4Q58EX7 1191 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 UTP14CQ5TAP6 766 aaKnown RBP4.25□□□□□ -1.73
USP46-205ENST00000504078 VPS53Q5VIR6 699 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 PLPP4Q5VZY2 271 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 RCSD1Q6JBY9 416 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 CCDC62Q6P9F0 684 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 RUFY4Q6ZNE9 571 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 SESTD1Q86VW0 696 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 IFNL3Q8IZI9 196 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 ADSSL1Q8N142 457 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 KBTBD3Q8NAB2 608 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 SMRP1Q8NCR6 262 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 DCAF4Q8WV16 495 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 SEPT8Q92599 483 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 ATP6V0A1Q93050 837 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 TP53INP1Q96A56 240 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 RMDN1Q96DB5 314 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 MSLNLQ96KJ4 702 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 SPATA33Q96N06 139 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 SAMD11Q96NU1 681 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 MDFIQ99750 246 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 HINFPQ9BQA5 517 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 ZKSCAN3Q9BRR0 538 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 C11orf84Q9BUA3 381 aaPredicted RBP4.25□□□□□ -1.73
USP46-205ENST00000504078 KATNAL1Q9BW62 490 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 SEZ6LQ9BYH1 1024 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 UBA5Q9GZZ9 404 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 BCAS3Q9H6U6 928 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 PCMTD2Q9NV79 361 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 CTNNA3Q9UI47 895 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
USP46-205ENST00000504078 COL4A3Q01955 1670 aa4.25□□□□□ -1.73
USP46-205ENST00000504078 ZFHX4Q86UP3 3567 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 NEDD4P46934 1319 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 TRIOO75962 3097 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 LOC730098B7Z3J9 87 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 FAM229AH3BQW9 127 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 M0R082 166 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 HAS3O00219 553 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 KHNYNO15037 678 aaKnown RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 RNF113AO15541 343 aaKnown RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 DHX16O60231 1041 aaKnown RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 KPNA6O60684 536 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 EFCAB14O75071 495 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 BRD1O95696 1058 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 LGALS2P05162 132 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 PDHBP11177 359 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 CASTP20810 708 aaKnown RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 MARK3P27448 753 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 HOXA13P31271 388 aaPredicted RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 CA8P35219 290 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 PBX3P40426 434 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 ARHGAP4P98171 946 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 TMEM62Q0P6H9 643 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 USP4Q13107 963 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 LAMC2Q13753 1193 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 PTPN21Q16825 1174 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 HSP90AB4PQ58FF6 505 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 SPOUT1Q5T280 376 aaKnown RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 ARHGEF16Q5VV41 709 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 CWF19L1Q69YN2 538 aaKnown RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 ZSCAN25Q6NSZ9 544 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 TMED8Q6PL24 325 aaPredicted RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 BMP8AQ7Z5Y6 402 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 SERINC5Q86VE9 423 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 TBC1D10CQ8IV04 446 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 KIAA2013Q8IYS2 634 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 KLHL23Q8NBE8 558 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 KREMEN2Q8NCW0 462 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 FLCNQ8NFG4 579 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 ZNF417Q8TAU3 575 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 SYTL5Q8TDW5 730 aaPredicted RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 OTUD7AQ8TE49 926 aaPredicted RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 POF1BQ8WVV4 589 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 RIN2Q8WYP3 895 aaPredicted RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 TOP1MTQ969P6 601 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 MKL1Q969V6 931 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 IL17RAQ96F46 866 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 ZNF587Q96SQ5 575 aaPredicted RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 PPP1R16BQ96T49 567 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 TMEM47Q9BQJ4 181 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 NIFKQ9BYG3 293 aaKnown RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 RC3H2Q9HBD1 1191 aaKnown RBP4.24□□□□□ -1.73
USP46-205ENST00000504078 SETD4Q9NVD3 440 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 DOLKQ9UPQ8 538 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 RNF114Q9Y508 228 aa4.24□□□□□ -1.73
USP46-205ENST00000504078 MYH7BA7E2Y1 1941 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms