RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 ATP4AP20648 1035 aa17.92■□□□□ 0.46
DDR1-250ENST00000503628 CA8P35219 290 aa17.92■□□□□ 0.46
DDR1-250ENST00000503628 PDXDC2PQ6P474 469 aa17.92■□□□□ 0.46
DDR1-250ENST00000503628 HEATR3Q7Z4Q2 680 aa17.92■□□□□ 0.46
DDR1-250ENST00000503628 RAB11FIP4Q86YS3 637 aa17.92■□□□□ 0.46
DDR1-250ENST00000503628 CCDC60Q8IWA6 550 aaPredicted RBP17.92■□□□□ 0.46
DDR1-250ENST00000503628 SLC39A11Q8N1S5 342 aa17.92■□□□□ 0.46
DDR1-250ENST00000503628 FLCNQ8NFG4 579 aa17.92■□□□□ 0.46
DDR1-250ENST00000503628 TMEM87BQ96K49 555 aa17.92■□□□□ 0.46
DDR1-250ENST00000503628 DBR1Q9UK59 544 aaKnown RBP17.92■□□□□ 0.46
DDR1-250ENST00000503628 MYH9P35579 1960 aaKnown RBP17.91■□□□□ 0.46
DDR1-250ENST00000503628 CCDC69A6NI79 296 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 MEIS1O00470 390 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 C22orf31O95567 290 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 CXCL14O95715 111 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 HMGB1P09429 215 aaKnown RBP17.91■□□□□ 0.46
DDR1-250ENST00000503628 ATAT1Q5SQI0 421 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 CWF19L1Q69YN2 538 aaKnown RBP17.91■□□□□ 0.46
DDR1-250ENST00000503628 SWSAP1Q6NVH7 229 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 ECHDC2Q86YB7 292 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 PLCD3Q8N3E9 789 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 METTL13Q8N6R0 699 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 RNF169Q8NCN4 708 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 ZNF302Q9NR11 478 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 DMXL1Q9Y485 3027 aa17.91■□□□□ 0.46
DDR1-250ENST00000503628 NT5C1B-RDH14C9J2C7 533 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 SEC24BO95487 1268 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 ZSCAN20P17040 1043 aaPredicted RBP17.9■□□□□ 0.46
DDR1-250ENST00000503628 CLLU1OSQ5K130 101 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 KIAA1841Q6NSI8 718 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 DHX32Q7L7V1 743 aaKnown RBP17.9■□□□□ 0.46
DDR1-250ENST00000503628 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
DDR1-250ENST00000503628 CKAP2LQ8IYA6 745 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 TMTC2Q8N394 836 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 FEZF2Q8TBJ5 459 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
DDR1-250ENST00000503628 USTQ9Y2C2 406 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 CACNA1AO00555 2505 aa17.9■□□□□ 0.46
DDR1-250ENST00000503628 SH2B2O14492 632 aaPredicted RBP17.89■□□□□ 0.45
DDR1-250ENST00000503628 EOMESO95936 686 aa17.89■□□□□ 0.45
DDR1-250ENST00000503628 CALM1P0DP23 149 aa17.89■□□□□ 0.45
DDR1-250ENST00000503628 CALM2P0DP24 149 aa17.89■□□□□ 0.45
DDR1-250ENST00000503628 CALM3P0DP25 149 aa17.89■□□□□ 0.45
DDR1-250ENST00000503628 NPR3P17342 541 aa17.89■□□□□ 0.45
DDR1-250ENST00000503628 METAP2P50579 478 aaKnown RBP eCLIP17.89■□□□□ 0.453e-6■■■■□ 25.7
DDR1-250ENST00000503628 EXOSC10Q01780 885 aaKnown RBP17.89■□□□□ 0.45
DDR1-250ENST00000503628 ANO3Q9BYT9 981 aa17.89■□□□□ 0.45
DDR1-250ENST00000503628 CYP26B1Q9NR63 512 aa17.89■□□□□ 0.45
DDR1-250ENST00000503628 DHX15O43143 795 aaKnown RBP17.88■□□□□ 0.45
DDR1-250ENST00000503628 FOSP01100 380 aaPredicted RBP17.88■□□□□ 0.45
DDR1-250ENST00000503628 EPCAMP16422 314 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 AOC1P19801 751 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 PSMA5P28066 241 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 ZNF76P36508 570 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 ALDH7A1P49419 539 aaKnown RBP17.88■□□□□ 0.45
DDR1-250ENST00000503628 CLCN3P51790 818 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 BCAR1P56945 870 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 NLRP11P59045 1033 aaKnown RBP17.88■□□□□ 0.45
DDR1-250ENST00000503628 BMS1Q14692 1282 aaKnown RBP17.88■□□□□ 0.45
DDR1-250ENST00000503628 ANGPT1Q15389 498 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 WWC2Q6AWC2 1192 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 TYW1BQ6NUM6 668 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 MIS18BP1Q6P0N0 1132 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 TMTC3Q6ZXV5 915 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 VPS52Q8N1B4 723 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 FANCBQ8NB91 859 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 TMEM87AQ8NBN3 555 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 HELQQ8TDG4 1101 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 AUTS2Q8WXX7 1259 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 BBXQ8WY36 941 aaPredicted RBP17.88■□□□□ 0.45
DDR1-250ENST00000503628 LRRC2Q9BYS8 371 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 ADAMTS10Q9H324 1103 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 RIC8AQ9NPQ8 531 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 DZANK1Q9NVP4 752 aa17.88■□□□□ 0.45
DDR1-250ENST00000503628 EP300Q09472 2414 aaPredicted RBP17.88■□□□□ 0.45
DDR1-250ENST00000503628 FRYLO94915 3013 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.87■□□□□ 0.45
DDR1-250ENST00000503628 LIFRP42702 1097 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 NAPAP54920 295 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 TMC5Q6UXY8 1006 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 CCDC105Q8IYK2 499 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 SLC22A17Q8WUG5 538 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 TMEM169Q96HH4 297 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 ZNF668Q96K58 619 aaPredicted RBP17.87■□□□□ 0.45
DDR1-250ENST00000503628 AKT3Q9Y243 479 aa17.87■□□□□ 0.45
DDR1-250ENST00000503628 MAFBQ9Y5Q3 323 aaPredicted RBP17.87■□□□□ 0.45
DDR1-250ENST00000503628 DENND4AQ7Z401 1863 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 A0A0U1RQF3 1178 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 CPA1P15085 419 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 EIF4BP23588 611 aaKnown RBP17.86■□□□□ 0.45
DDR1-250ENST00000503628 SREBF1P36956 1147 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 TDGQ13569 410 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 EFCAB12Q6NXP0 572 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 NIPA1Q7RTP0 329 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 ZNF598Q86UK7 904 aaKnown RBP17.86■□□□□ 0.45
DDR1-250ENST00000503628 PLA2G4DQ86XP0 818 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 DTWD2Q8NBA8 298 aa17.86■□□□□ 0.45
DDR1-250ENST00000503628 ACSF2Q96CM8 615 aaPredicted RBP17.86■□□□□ 0.45
DDR1-250ENST00000503628 TCEANC2Q96MN5 208 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms