RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 XPO4Q9C0E2 1151 aaKnown RBP3.05□□□□□ -1.92
NEDD4-204ENST00000503468 IFNKQ9P0W0 207 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 MCM8Q9UJA3 840 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 DAGLAQ9Y4D2 1042 aa3.05□□□□□ -1.92
NEDD4-204ENST00000503468 SENP3-EIF4A1A0A087X0R7 540 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 A0A0A0MRY4 1105 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TMEM232C9JQI7 657 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TMCC1O94876 653 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 STARD3NLO95772 234 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 MMP1P03956 469 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SPATA31C1P0DKV0 1188 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 MAGEA12P43365 314 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 EIF3BP55884 814 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 FKBP4Q02790 459 aaKnown RBP eCLIP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 MAP3K12Q12852 859 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CLUL1Q15846 466 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SGSM1Q2NKQ1 1148 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 EXOSC6Q5RKV6 272 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 COL23A1Q86Y22 540 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC13Q8IYE1 715 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 NIPA2Q8N8Q9 360 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 PPFIBP2Q8ND30 876 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 FBF1Q8TES7 1133 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 ATRIPQ8WXE1 791 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM4Q9C037 500 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 VCPKMTQ9H867 229 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 PRDM11Q9NQV5 511 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 NSFL1CQ9UNZ2 370 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CHD7Q9P2D1 2997 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 DOCK3Q8IZD9 2030 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TNRC18O15417 2968 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CARNS1A5YM72 827 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM64CA6NLI5 447 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 COQ9O75208 318 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 RASSF9O75901 435 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 MICAL2O94851 1124 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SKIP12755 728 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 USP14P54578 494 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 DLX5P56178 289 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 DEUP1Q05D60 604 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 DPYDQ12882 1025 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 IKZF1Q13422 519 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 RILPL1Q5EBL4 403 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 LRRC31Q6UY01 552 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CEP128Q6ZU80 1094 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 RSPH3Q86UC2 560 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TBC1D10CQ8IV04 446 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 ENAHQ8N8S7 591 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC63Q8NA47 563 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 PIP4K2CQ8TBX8 421 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 XAGE2Q96GT9 111 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CRISPLD2Q9H0B8 497 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 JADE2Q9NQC1 790 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CTTNBP2NLQ9P2B4 639 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SEL1LQ9UBV2 794 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 STK17AQ9UEE5 414 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 POLLQ9UGP5 575 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 AKR1B15C9JRZ8 316 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CD37P11049 281 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 IVDP26440 423 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 ECHS1P30084 290 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TM4SF4P48230 202 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 PSMD8P48556 350 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SCNN1DP51172 638 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 GNGT1P63211 74 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 HHATQ5VTY9 493 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 NUGGCQ68CJ6 796 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TOGARAM2Q6ZUX3 1019 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 FUKQ8N0W3 1084 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 AOPEPQ8N6M6 819 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 HOXB13Q92826 284 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 BHMTQ93088 406 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 PNMA5Q96PV4 448 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 BTG4Q9NY30 223 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 MIS18AQ9NYP9 233 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 STXBP5LQ9Y2K9 1186 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 TACC1O75410 805 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CNMDO75829 334 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 NPTXRO95502 500 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 LMNAP02545 664 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 EIF2S2P20042 333 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 LRPAP1P30533 357 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SKIV2L2P42285 1042 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 SERPINB8P50452 374 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 PAPOLAP51003 745 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 AK2P54819 239 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 BLMHQ13867 455 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 DSC3Q14574 896 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 LBRQ14739 615 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 NR1I3Q14994 352 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 ENOX2Q16206 610 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 ME3Q16798 604 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC144BQ3MJ40 725 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 RNF187Q5TA31 235 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF598Q86UK7 904 aaKnown RBP3.04□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC144CPQ8IYA2 1237 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 FAM81AQ8TBF8 368 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 DDX12PQ92771 950 aa3.04□□□□□ -1.92
NEDD4-204ENST00000503468 THOC1Q96FV9 657 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms