RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 KIAA1024Q9UPX6 916 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 MORC2Q9Y6X9 1032 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 ENPP3O14638 875 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 GJB5O95377 273 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 ZSCAN22P10073 491 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 CDC25AP30304 524 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 BECN1Q14457 450 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 HYIQ5T013 277 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 RHPN2Q8IUC4 686 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 MYOCDQ8IZQ8 938 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 LINC01599Q8WXQ3 324 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 SCLT1Q96NL6 688 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 GCOM2Q9BZD3 368 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 TMX1Q9H3N1 280 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 DDX19AQ9NUU7 478 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 ST3GAL5Q9UNP4 418 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 YBX2Q9Y2T7 364 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 COL4A3BPQ9Y5P4 624 aa20.3■□□□□ 0.84
PDLIM7-209ENST00000503346 A0A087WZ62 844 aa20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 ASAP2O43150 1006 aa20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 NFX1Q12986 1120 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 ZNF697Q5TEC3 545 aa20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 KCTD17Q8N5Z5 321 aa20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 PRPF31Q8WWY3 499 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 TOP1MTQ969P6 601 aa20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 ZNF668Q96K58 619 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 USP28Q96RU2 1077 aa20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 FDXACB1Q9BRP7 624 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 TSPYL2Q9H2G4 693 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-209ENST00000503346 SZT2Q5T011 3432 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 ARHGEF35A5YM69 484 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 SLC26A4O43511 780 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 USO1O60763 962 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 F13A1P00488 732 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 ARL2P36404 184 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 LONP1P36776 959 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 LAMTOR4Q0VGL1 99 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 PKP1Q13835 747 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 TMCO2Q7Z6W1 182 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 RTN4RL1Q86UN2 441 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 KSR1Q8IVT5 923 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 NLRP4Q96MN2 994 aa20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 TTYH1Q9H313 450 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-209ENST00000503346 EVPLQ92817 2033 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 TLL1O43897 1013 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 MYOGP15173 224 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 CYP11B2P19099 503 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 GRIN1Q05586 938 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 MXD4Q14582 209 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 PADI6Q6TGC4 694 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 Q7L0L9 218 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 DEFB123Q8N688 67 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 MCPH1Q8NEM0 835 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 PNMA5Q96PV4 448 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 RAD9AQ99638 391 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 ZBED2Q9BTP6 218 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 INO80BQ9C086 356 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 BHMT2Q9H2M3 363 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 NKX2-4Q9H2Z4 354 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 IFT122Q9HBG6 1241 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 DNM3Q9UQ16 869 aa20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 SRPRBQ9Y5M8 271 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-209ENST00000503346 MGEA5O60502 916 aa20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 EYA4O95677 639 aa20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 HTRA4P83105 476 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 DSC3Q14574 896 aa20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 SLC39A14Q15043 492 aa20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 FOXD4L5Q5VV16 416 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 CABP7Q86V35 215 aa20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 FOXD4L4Q8WXT5 416 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 ZNF396Q96N95 335 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 NT5C3AQ9H0P0 336 aa20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 SEMA6BQ9H3T3 888 aa20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 RGS18Q9NS28 235 aa20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 FBXO2Q9UK22 296 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-209ENST00000503346 E9PMD0 336 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 CA3P07451 260 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 MARCKSP29966 332 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 UBA7P41226 1012 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 POU5F1BQ06416 359 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 GRB10Q13322 594 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 TMEM119Q4V9L6 283 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 KCNK18Q7Z418 384 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 SRGAP1Q7Z6B7 1085 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 RNF149Q8NC42 400 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 ASAP3Q8TDY4 903 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 POLR3FQ9H1D9 316 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 ZNF576Q9H609 170 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 SLC28A3Q9HAS3 691 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 C1orf112Q9NSG2 853 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 INSL6Q9Y581 213 aa20.25■□□□□ 0.83
PDLIM7-209ENST00000503346 MICAL3Q7RTP6 2002 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 DENND3A2RUS2 1198 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 CSDE1O75534 798 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 SRGAP2CP0DJJ0 459 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 FGFR4P22455 802 aa20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 SFPQP23246 707 aaKnown RBP eCLIP20.24■□□□□ 0.83
PDLIM7-209ENST00000503346 GLRA2P23416 452 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms