RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
TNPO1-202ENST00000503084 PRR23BQ6ZRT6 265 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 FCHSD1Q86WN1 690 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 ABI1Q8IZP0 508 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
TNPO1-202ENST00000503084 STAMQ92783 540 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 TMEM169Q96HH4 297 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 PCDHA2Q9Y5H9 948 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 RALGAPA1Q6GYQ0 2036 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 RRN3P2A6NIE6 340 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 FAM170BA6NMN3 283 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 ANHXE9PGG2 379 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 HOXA2O43364 376 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 MAGEA9P43362 315 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 CLCN4P51793 760 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 MLF2Q15773 248 aaPredicted RBP13.16□□□□□ -0.3
TNPO1-202ENST00000503084 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
TNPO1-202ENST00000503084 BCL7CQ8WUZ0 217 aaPredicted RBP13.16□□□□□ -0.3
TNPO1-202ENST00000503084 TTC14Q96N46 770 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 AMNQ9BXJ7 453 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 CDHR5Q9HBB8 845 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 RTEL1Q9NZ71 1219 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 FREM2Q5SZK8 3169 aa13.16□□□□□ -0.3
TNPO1-202ENST00000503084 GSTTP1A0A1W2PQM5 241 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 TMEM8BA6NDV4 472 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 TM4SF5O14894 197 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
TNPO1-202ENST00000503084 HMMRO75330 724 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 STAM2O75886 525 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 TDGF1P13385 188 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 CD72P21854 359 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 POLGP54098 1239 aaPredicted RBP13.15□□□□□ -0.3
TNPO1-202ENST00000503084 BCAR1P56945 870 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 GPC5P78333 572 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 GIT2Q14161 759 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 DSC3Q14574 896 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 ZMYM1Q5SVZ6 1142 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 FAM228AQ86W67 206 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 SENP7Q9BQF6 1050 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 MYL10Q9BUA6 226 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
TNPO1-202ENST00000503084 OSBPL6Q9BZF3 934 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 LTB4R2Q9NPC1 389 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 MAN1C1Q9NR34 630 aa13.15□□□□□ -0.3
TNPO1-202ENST00000503084 MAP3K20Q9NYL2 800 aaKnown RBP13.15□□□□□ -0.3
TNPO1-202ENST00000503084 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 GCOM1H8Y6P7 765 aaPredicted RBP13.14□□□□□ -0.31
TNPO1-202ENST00000503084 POLR2MP0CAP2 368 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 SPINK2P20155 84 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 LIMK1P53667 647 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 PLCB4Q15147 1175 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 FAM43BQ6ZT52 329 aaPredicted RBP13.14□□□□□ -0.31
TNPO1-202ENST00000503084 GET4Q7L5D6 327 aaPredicted RBP13.14□□□□□ -0.31
TNPO1-202ENST00000503084 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 ZCCHC14Q8WYQ9 949 aaKnown RBP13.14□□□□□ -0.31
TNPO1-202ENST00000503084 PPP1R16BQ96T49 567 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 RPP25Q9BUL9 199 aaKnown RBP13.14□□□□□ -0.31
TNPO1-202ENST00000503084 VN1R3Q9BXE9 311 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 SMARCAD1Q9H4L7 1026 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 LAMA1P25391 3075 aa13.14□□□□□ -0.31
TNPO1-202ENST00000503084 CYSRT1A8MQ03 144 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 GPR182O15218 404 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 ZC3H11AO75152 810 aaKnown RBP eCLIP13.13□□□□□ -0.31
TNPO1-202ENST00000503084 LAMP2P13473 410 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 KCNA2P16389 499 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 TARSP26639 723 aaKnown RBP13.13□□□□□ -0.31
TNPO1-202ENST00000503084 ALDH7A1P49419 539 aaKnown RBP13.13□□□□□ -0.31
TNPO1-202ENST00000503084 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
TNPO1-202ENST00000503084 PRKCQQ04759 706 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 MTAPQ13126 283 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 AASDHQ4L235 1098 aaPredicted RBP13.13□□□□□ -0.31
TNPO1-202ENST00000503084 SOWAHCQ53LP3 525 aaPredicted RBP13.13□□□□□ -0.31
TNPO1-202ENST00000503084 DDX53Q86TM3 631 aaKnown RBP13.13□□□□□ -0.31
TNPO1-202ENST00000503084 NME8Q8N427 588 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 CELF5Q8N6W0 485 aaKnown RBP13.13□□□□□ -0.31
TNPO1-202ENST00000503084 SEPT1Q8WYJ6 367 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 CLDN23Q96B33 292 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 PCYT2Q99447 389 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
TNPO1-202ENST00000503084 CCDC195A0A1B0GUA6 201 aa13.12□□□□□ -0.31
TNPO1-202ENST00000503084 TRIM6-TRIM34B2RNG4 842 aa13.12□□□□□ -0.31
TNPO1-202ENST00000503084 INPPL1O15357 1258 aa13.12□□□□□ -0.31
TNPO1-202ENST00000503084 RFPL2O75678 378 aa13.12□□□□□ -0.31
TNPO1-202ENST00000503084 KCNK5O95279 499 aa13.12□□□□□ -0.31
TNPO1-202ENST00000503084 CNPP09543 421 aaKnown RBP13.12□□□□□ -0.31
TNPO1-202ENST00000503084 MYBP10242 640 aa13.12□□□□□ -0.31
TNPO1-202ENST00000503084 KLRC2P26717 231 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms