RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 DNM1LO00429 736 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 BACH1O14867 736 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 TGFB1I1O43294 461 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 DR1Q01658 176 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 RBM17Q96I25 401 aaKnown RBP26.58■■□□□ 1.85
DDX41-202ENST00000503078 NAP1L3Q99457 506 aaPredicted RBP26.58■■□□□ 1.85
DDX41-202ENST00000503078 JPH2Q9BR39 696 aaPredicted RBP26.58■■□□□ 1.85
DDX41-202ENST00000503078 CARD9Q9H257 536 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 BCAS3Q9H6U6 928 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 CD248Q9HCU0 757 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 LRRC4BQ9NT99 713 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 USP40Q9NVE5 1235 aa26.58■■□□□ 1.85
DDX41-202ENST00000503078 PLS1Q14651 629 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 DUPD1Q68J44 220 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 CPLX4Q7Z7G2 160 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 HOOK3Q86VS8 718 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 FAM186BQ8IYM0 893 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 FAM20AQ96MK3 541 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 OLFML3Q9NRN5 406 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 C6orf229H3BNL8 230 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 RAD21O60216 631 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 PSMC2P35998 433 aaKnown RBP26.57■■□□□ 1.84
DDX41-202ENST00000503078 MAP2K2P36507 400 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 CYP4A11Q02928 519 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 PRPF4BQ13523 1007 aaKnown RBP26.57■■□□□ 1.84
DDX41-202ENST00000503078 SPRED3Q2MJR0 410 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 CENPTQ96BT3 561 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 ERP44Q9BS26 406 aa26.57■■□□□ 1.84
DDX41-202ENST00000503078 GOLGA6L10A0A0M3HER8 536 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 PPP1R12BO60237 982 aaPredicted RBP26.56■■□□□ 1.84
DDX41-202ENST00000503078 HLA-DOAP06340 250 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 DRD4P21917 467 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 LACTB2Q53H82 288 aaPredicted RBP26.56■■□□□ 1.84
DDX41-202ENST00000503078 SEPT12Q8IYM1 358 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 ZKSCAN4Q969J2 545 aaPredicted RBP26.56■■□□□ 1.84
DDX41-202ENST00000503078 ZDHHC18Q9NUE0 388 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 DNAJC12Q9UKB3 198 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 DAAM1Q9Y4D1 1078 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 IGSF9BQ9UPX0 1349 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 PHF20L1A8MW92 1017 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 FAM86B1E9PN63 330 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 EYA4O95677 639 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 FAM86B2P0C5J1 330 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 GAP43P17677 238 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 ABCB4P21439 1286 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 DRAP1Q14919 205 aaPredicted RBP26.56■■□□□ 1.84
DDX41-202ENST00000503078 P3H4Q92791 437 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 SYT11Q9BT88 431 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 SUGT1Q9Y2Z0 365 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 RABGAP1Q9Y3P9 1069 aa26.56■■□□□ 1.84
DDX41-202ENST00000503078 CAND2O75155 1236 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 BBOX1O75936 387 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 ERMARDQ5T6L9 678 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 DCAF4Q8WV16 495 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 XPO6Q96QU8 1125 aaKnown RBP26.55■■□□□ 1.84
DDX41-202ENST00000503078 ZMYM2Q9UBW7 1377 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 FAM187AA6NFU0 413 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 EIF3DO15371 548 aaKnown RBP eCLIP26.55■■□□□ 1.84
DDX41-202ENST00000503078 NUDT17P0C025 328 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 FMO5P49326 533 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 CHMP6Q96FZ7 201 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 CCDC17Q96LX7 622 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 POLR3CQ9BUI4 534 aaPredicted RBP26.55■■□□□ 1.84
DDX41-202ENST00000503078 EPB41L4BQ9H329 900 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 VAV3Q9UKW4 847 aa26.55■■□□□ 1.84
DDX41-202ENST00000503078 RDXP35241 583 aaKnown RBP26.54■■□□□ 1.84
DDX41-202ENST00000503078 NFIL3Q16649 462 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 GPATCH11Q8N954 259 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 MDM1Q8TC05 714 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 FAM129AQ9BZQ8 928 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 ERVK-5Q9HDB9 667 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 PNMA2Q9UL42 364 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 SPDYE3A6NKU9 549 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 MSH4O15457 936 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 SREBF1P36956 1147 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 SCTRP47872 440 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 DHX34Q14147 1143 aaKnown RBP26.54■■□□□ 1.84
DDX41-202ENST00000503078 CLUL1Q15846 466 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 SLFN13Q68D06 897 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 FUKQ8N0W3 1084 aa26.54■■□□□ 1.84
DDX41-202ENST00000503078 PABPC3Q9H361 631 aaKnown RBP26.54■■□□□ 1.84
DDX41-202ENST00000503078 SFI1A8K8P3 1242 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 ADRA2BP18089 450 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 PMS2P54278 862 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 RINT1Q6NUQ1 792 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 CYB5D1Q6P9G0 228 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 ADAT2Q7Z6V5 191 aaKnown RBP26.53■■□□□ 1.84
DDX41-202ENST00000503078 ARHGEF26Q96DR7 871 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 EIF2AK1Q9BQI3 630 aaKnown RBP26.53■■□□□ 1.84
DDX41-202ENST00000503078 MKNK1Q9BUB5 465 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 AMNQ9BXJ7 453 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 GPR88Q9GZN0 384 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 SHBGP04278 402 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 CCDC172P0C7W6 258 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 COPB2P35606 906 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 KLRC3Q07444 240 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 FMNL3Q8IVF7 1028 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 NEK9Q8TD19 979 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 CCT6BQ92526 530 aa26.53■■□□□ 1.84
DDX41-202ENST00000503078 GLG1Q92896 1179 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms