RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 RTN4RL1Q86UN2 441 aaPredicted RBP5.83□□□□□ -1.48
HTT-202ENST00000502820 FCHSD1Q86WN1 690 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 MCF2L2Q86YR7 1114 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 ABI1Q8IZP0 508 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 FEZF2Q8TBJ5 459 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 LMBR1Q8WVP7 490 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 LINC01599Q8WXQ3 324 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 GPKOWQ92917 476 aaPredicted RBP eCLIP5.83□□□□□ -1.48
HTT-202ENST00000502820 IWS1Q96ST2 819 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 DSCC1Q9BVC3 393 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 USP26Q9BXU7 913 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 BCO2Q9BYV7 579 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 IL25Q9H293 177 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 AGO3Q9H9G7 860 aaKnown RBP5.83□□□□□ -1.48
HTT-202ENST00000502820 NGRNQ9NPE2 291 aaKnown RBP5.83□□□□□ -1.48
HTT-202ENST00000502820 ARGLU1Q9NWB6 273 aaPredicted RBP5.83□□□□□ -1.48
HTT-202ENST00000502820 FAM53CQ9NYF3 392 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 RTEL1Q9NZ71 1219 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 LHX6Q9UPM6 363 aa5.83□□□□□ -1.48
HTT-202ENST00000502820 NEDD4P46934 1319 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 EIF4E1BA6NMX2 242 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 HIP1O00291 1037 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 RIOK3O14730 519 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 CLGNO14967 610 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 ADCY5O95622 1261 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 SSBP05455 408 aaKnown RBP eCLIP5.82□□□□□ -1.48
HTT-202ENST00000502820 SLFN14P0C7P3 912 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 CCDC192P0DO97 292 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 SNHG28P0DPA3 235 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 PDHBP11177 359 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 TOP1P11387 765 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 LAG3P18627 525 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 SPINK2P20155 84 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 CD72P21854 359 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 HOXA13P31271 388 aaPredicted RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 METAP2P50579 478 aaKnown RBP eCLIP5.82□□□□□ -1.48
HTT-202ENST00000502820 TUBB4BP68371 445 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 MRPS6P82932 125 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 NCBP1Q09161 790 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 SNW1Q13573 536 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 CDC37Q16543 378 aaPredicted RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 AASDHQ4L235 1098 aaPredicted RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 FAM26DQ5JW98 314 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 TTC22Q5TAA0 569 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 IER5Q5VY09 327 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 KIAA1841Q6NSI8 718 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 DCLRE1AQ6PJP8 1040 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 CWC27Q6UX04 472 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 TMEM184AQ6ZMB5 413 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 KIF18AQ8NI77 898 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 NETO1Q8TDF5 533 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 GLG1Q92896 1179 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 EMID1Q96A84 441 aaPredicted RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 TTC14Q96N46 770 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 ZNF558Q96NG5 402 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 GPR20Q99678 358 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 ADAM2Q99965 735 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 TMEM47Q9BQJ4 181 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 TACO1Q9BSH4 297 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 SRRTQ9BXP5 876 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 FTHL17Q9BXU8 183 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 RC3H2Q9HBD1 1191 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 ATP6V0A4Q9HBG4 840 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 PARD6AQ9NPB6 346 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 PXMP2Q9NR77 195 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 ARHGEF3Q9NR81 526 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 PKD2L1Q9P0L9 805 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 TUBE1Q9UJT0 475 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 PADI3Q9ULW8 664 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 BAHCC1Q9P281 2608 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 DMXL1Q9Y485 3027 aa5.82□□□□□ -1.48
HTT-202ENST00000502820 RIF1Q5UIP0 2472 aaKnown RBP5.82□□□□□ -1.48
HTT-202ENST00000502820 EPG5Q9HCE0 2579 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 NRCAMQ92823 1304 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 ZNF213O14771 459 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 FSCN2O14926 492 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 SPTLC1O15269 473 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 PROS1P07225 676 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 GLULP15104 373 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 KLRC2P26717 231 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 RING1Q06587 406 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 ZNF543Q08ER8 600 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 FOXC1Q12948 553 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 KCNC3Q14003 757 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 GRIK4Q16099 956 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 CCDC6Q16204 474 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 TAF2Q6P1X5 1199 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 KCNV1Q6PIU1 500 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 KCNT2Q6UVM3 1135 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 UNQ6494/PRO21346Q6UXR6 183 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 MFSD6Q6ZSS7 791 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 DGKHQ86XP1 1220 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 SLC44A3Q8N4M1 653 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 MRPL43Q8N983 215 aaKnown RBP5.81□□□□□ -1.48
HTT-202ENST00000502820 FAM200AQ8TCP9 573 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 KIF12Q96FN5 646 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 RNF41Q9H4P4 317 aaPredicted RBP5.81□□□□□ -1.48
HTT-202ENST00000502820 EHMT1Q9H9B1 1298 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 PIDD1Q9HB75 910 aa5.81□□□□□ -1.48
HTT-202ENST00000502820 SPG21Q9NZD8 308 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms