RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	GPC3	P51654	580 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	CTTN	Q14247	550 aa	Known RBP	11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	PDIA5	Q14554	519 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	XKR9	Q5GH70	373 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	PLA2G4F	Q68DD2	849 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	FAM117B	Q6P1L5	589 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	NPAS4	Q8IUM7	802 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	SP7	Q8TDD2	431 aa	Predicted RBP	11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	NACC1	Q96RE7	527 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	TGS1	Q96RS0	853 aa	Known RBP	11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	CEP89	Q96ST8	783 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	ADAMTS10	Q9H324	1103 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	PRDM12	Q9H4Q4	367 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	DHX33	Q9H6R0	707 aa	Known RBP	11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	ERVK-5	Q9HDB9	667 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	RGS18	Q9NS28	235 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	RWDD3	Q9Y3V2	267 aa		11.74	□□□□□ -0.53
FXR1-222	ENST00000498658	LINC01553	A4QN01	128 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	TMEM150B	A6NC51	233 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	POTEM	A6NI47	508 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658		K7ELQ4	463 aa	Predicted RBP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	GTPBP6	O43824	516 aa	Predicted RBP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	DGAT1	O75907	488 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	DARS	P14868	501 aa	Known RBP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	SFPQ	P23246	707 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	RPA1	P27694	616 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	PRPH	P41219	470 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	TTC3	P53804	2025 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	ERVK-21	P61565	698 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	PTGDR	Q13258	359 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	MYO9B	Q13459	2157 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	COL4A6	Q14031	1691 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	MXD4	Q14582	209 aa	Predicted RBP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	DTHD1	Q6ZMT9	781 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	SLC24A5	Q71RS6	500 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	BRAP	Q7Z569	592 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	FAM228A	Q86W67	206 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	RHPN2	Q8IUC4	686 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	MAFA	Q8NHW3	353 aa	Predicted RBP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	TMEM40	Q8WWA1	233 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	PSPC1	Q8WXF1	523 aa	Known RBP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	ARNTL2	Q8WYA1	636 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	MTR	Q99707	1265 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	SH2D3A	Q9BRG2	576 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	CDHR5	Q9HBB8	845 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	CHST12	Q9NRB3	414 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	CHD7	Q9P2D1	2997 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	LRFN2	Q9ULH4	789 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	PCDHB7	Q9Y5E2	793 aa		11.73	□□□□□ -0.53
FXR1-222	ENST00000498658	LCHN	A4D1U4	455 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	C19orf67	A6NJJ6	358 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	BMP15	O95972	392 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	SKI	P12755	728 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	PDIA4	P13667	645 aa	Known RBP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	CD44	P16070	742 aa	Known RBP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	POU3F3	P20264	500 aa	Predicted RBP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	SARS	P49591	514 aa	Known RBP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	TOB1	P50616	345 aa	Predicted RBP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	NPEPPS	P55786	919 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	EMC2	Q15006	297 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	CATSPER3	Q86XQ3	398 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	FIBCD1	Q8N539	461 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	KCTD17	Q8N5Z5	321 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	C4orf32	Q8N8J7	132 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	SNX21	Q969T3	373 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	PPP1R16B	Q96T49	567 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	ADAM2	Q99965	735 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	TMX1	Q9H3N1	280 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	ELAC1	Q9H777	363 aa	Known RBP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	DACT1	Q9NYF0	836 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	LMCD1	Q9NZU5	365 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	LRWD1	Q9UFC0	647 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	DBR1	Q9UK59	544 aa	Known RBP	11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	PCDHB6	Q9Y5E3	794 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	COL4A3BP	Q9Y5P4	624 aa		11.72	□□□□□ -0.53
FXR1-222	ENST00000498658	ADGRA3	Q8IWK6	1321 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	HOXA2	O43364	376 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	DGKI	O75912	1065 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	SPATA31C1	P0DKV0	1188 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	IGFBP4	P22692	258 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	RARRES1	P49788	294 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	POU5F1B	Q06416	359 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	NCBP1	Q09161	790 aa	Known RBP	11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	DRP2	Q13474	957 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	TFDP1	Q14186	410 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	BTG3	Q14201	252 aa	Predicted RBP	11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	SRGAP1	Q7Z6B7	1085 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	CMTR2	Q8IYT2	770 aa	Known RBP	11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	IGSF22	Q8N9C0	903 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	MCPH1	Q8NEM0	835 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	PRPF31	Q8WWY3	499 aa	Known RBP	11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	LINC01599	Q8WXQ3	324 aa		11.71	□□□□□ -0.53
FXR1-222	ENST00000498658	RSPH1	Q8WYR4	309 aa		11.71	□□□□□ -0.53

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