RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 FAM20BO75063 409 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 ZBTB48P10074 688 aaPredicted RBP3.75□□□□□ -1.81
RBM39-242ENST00000498280 RGS3P49796 1198 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 RASGRF1Q13972 1273 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 TOB2Q14106 344 aaPredicted RBP3.75□□□□□ -1.81
RBM39-242ENST00000498280 FAM47CQ5HY64 1035 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 SYCE2Q6PIF2 218 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 GAREM2Q75VX8 874 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 FGD2Q7Z6J4 655 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 PRIMA1Q86XR5 153 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 VRK3Q8IV63 474 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 GSTCDQ8NEC7 633 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 RABGGTAQ92696 567 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 ZNF669Q96BR6 464 aaPredicted RBP3.75□□□□□ -1.81
RBM39-242ENST00000498280 TANGO6Q9C0B7 1094 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 ADARB2Q9NS39 739 aaKnown RBP3.75□□□□□ -1.81
RBM39-242ENST00000498280 KCNH7Q9NS40 1196 aa3.75□□□□□ -1.81
RBM39-242ENST00000498280 PPP1R1BQ9UD71 204 aaPredicted RBP3.75□□□□□ -1.81
RBM39-242ENST00000498280 RBM8AQ9Y5S9 174 aaKnown RBP3.75□□□□□ -1.81
RBM39-242ENST00000498280 KDM2BQ8NHM5 1336 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 A0A0A6YYK5 440 aaPredicted RBP3.74□□□□□ -1.81
RBM39-242ENST00000498280 PMS2P1A4D2B8 440 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 IGSF3O75054 1194 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 LMNAP02545 664 aaKnown RBP3.74□□□□□ -1.81
RBM39-242ENST00000498280 GCP02774 474 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 PROZP22891 400 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 CNGB1Q14028 1251 aaPredicted RBP3.74□□□□□ -1.81
RBM39-242ENST00000498280 C1QL3Q5VWW1 255 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 GLCCI1Q86VQ1 547 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 IGSF22Q8N9C0 903 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 ANKRD53Q8N9V6 530 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 WDR48Q8TAF3 677 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 SREK1Q8WXA9 508 aaKnown RBP3.74□□□□□ -1.81
RBM39-242ENST00000498280 PGBD4Q96DM1 585 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 RIOX1Q9H6W3 641 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 USP35Q9P2H5 1018 aa3.74□□□□□ -1.81
RBM39-242ENST00000498280 UBE2QL1A1L167 161 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 MASP2O00187 686 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 TRAF5O00463 557 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 GSTA4O15217 222 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 STC2O76061 302 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 STK10O94804 968 aaKnown RBP3.73□□□□□ -1.81
RBM39-242ENST00000498280 NR4A1P22736 598 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 APEX1P27695 318 aaKnown RBP3.73□□□□□ -1.81
RBM39-242ENST00000498280 SDHAP31040 664 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 C21orf58P58505 322 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 BPIFB4P59827 614 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 KRTAP10-11P60412 298 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 ALDH6A1Q02252 535 aaKnown RBP3.73□□□□□ -1.81
RBM39-242ENST00000498280 ELOA2Q8IYF1 753 aaPredicted RBP3.73□□□□□ -1.81
RBM39-242ENST00000498280 HAS1Q92839 578 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 MLST8Q9BVC4 326 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 CCDC113Q9H0I3 377 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 ZNHIT2Q9UHR6 403 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 ASB1Q9Y576 335 aa3.73□□□□□ -1.81
RBM39-242ENST00000498280 XDHP47989 1333 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 TCRBV16S1A1N1A0A5B0 115 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 SLC12A8A0AV02 714 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 KLRG2A4D1S0 409 aaPredicted RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 KRTAP29-1A8MX34 341 aaPredicted RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 PPFIA4O75335 1185 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 KRT37O76014 449 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 ERBB2P04626 1255 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 HNRNPLP14866 589 aaKnown RBP eCLIP3.72□□□□□ -1.81
RBM39-242ENST00000498280 ATP2B1P20020 1258 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 ZFP36P26651 326 aaKnown RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 CD38P28907 300 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 GTF2F1P35269 517 aaKnown RBP eCLIP3.72□□□□□ -1.81
RBM39-242ENST00000498280 MAN2A2P49641 1150 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 RABGGTBP53611 331 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 IRF9Q00978 393 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 TCIRG1Q13488 830 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 SF3A1Q15459 793 aaKnown RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 ELAVL1Q15717 326 aaKnown RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 TMEM177Q53S58 311 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 MBNL2Q5VZF2 373 aaKnown RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 KLHDC10Q6PID8 442 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 FAM111BQ6SJ93 734 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 BRAPQ7Z569 592 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 MRGPREQ86SM8 312 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 SYNE4Q8N205 404 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 NKD2Q969F2 451 aaPredicted RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 MIEF2Q96C03 454 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 DRC1Q96MC2 740 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 IPO9Q96P70 1041 aaKnown RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 CELF4Q9BZC1 486 aaKnown RBP3.72□□□□□ -1.81
RBM39-242ENST00000498280 SLC6A15Q9H2J7 730 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 DENND2AQ9ULE3 1009 aa3.72□□□□□ -1.81
RBM39-242ENST00000498280 GRXCR1A8MXD5 290 aa3.71□□□□□ -1.82
RBM39-242ENST00000498280 CDK4P11802 303 aa3.71□□□□□ -1.82
RBM39-242ENST00000498280 SLC6A3Q01959 620 aa3.71□□□□□ -1.82
RBM39-242ENST00000498280 RASA3Q14644 834 aa3.71□□□□□ -1.82
RBM39-242ENST00000498280 CKAP2LQ8IYA6 745 aa3.71□□□□□ -1.82
RBM39-242ENST00000498280 MB21D1Q8N884 522 aa3.71□□□□□ -1.82
RBM39-242ENST00000498280 OR5AN1Q8NGI8 311 aa3.71□□□□□ -1.82
RBM39-242ENST00000498280 SLC25A43Q8WUT9 341 aaPredicted RBP3.71□□□□□ -1.82
RBM39-242ENST00000498280 MAGEB10Q96LZ2 347 aaPredicted RBP3.71□□□□□ -1.82
RBM39-242ENST00000498280 GPR87Q9BY21 358 aa3.71□□□□□ -1.82
RBM39-242ENST00000498280 DNAI1Q9UI46 699 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms