RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 OPA1O60313 960 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 NOL4O94818 638 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 SYF2O95926 243 aaKnown RBP13.6□□□□□ -0.23
AFF3-215ENST00000498090 SSBP05455 408 aaKnown RBP eCLIP13.6□□□□□ -0.23
AFF3-215ENST00000498090 OSBPP22059 807 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 CIITAP33076 1130 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 ARHGAP4P98171 946 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 APBA1Q02410 837 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 C2orf54Q08AI8 447 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 PABPC4Q13310 644 aaKnown RBP eCLIP13.6□□□□□ -0.23
AFF3-215ENST00000498090 ALS2CLQ60I27 953 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 SNRNP48Q6IEG0 339 aaKnown RBP13.6□□□□□ -0.23
AFF3-215ENST00000498090 FMNL3Q8IVF7 1028 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 SYT2Q8N9I0 419 aaPredicted RBP13.6□□□□□ -0.23
AFF3-215ENST00000498090 HOMER2Q9NSB8 354 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 STIM2Q9P246 746 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 SLC45A1Q9Y2W3 748 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 DAAM1Q9Y4D1 1078 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 PCDHGC5Q9Y5F6 944 aa13.6□□□□□ -0.23
AFF3-215ENST00000498090 GOLGA6BA6NDN3 693 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 MANSC4A6NHS7 340 aaPredicted RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 GOLGA8KD6RF30 607 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 NKRFO15226 690 aaKnown RBP eCLIP13.59□□□□□ -0.23
AFF3-215ENST00000498090 N4BP1O75113 896 aaKnown RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 PRPF6O94906 941 aaKnown RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 SREBF1P36956 1147 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 POLR2FP61218 127 aaKnown RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 GFPT1Q06210 699 aaPredicted RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 KLHL30Q0D2K2 578 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 ASIC2Q16515 512 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 KNOP1Q1ED39 458 aaKnown RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 BMT2Q1RMZ1 405 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 KLHDC7AQ5VTJ3 777 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 GBP6Q6ZN66 633 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 EIF1ADQ8N9N8 165 aaKnown RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 ETNPPLQ8TBG4 499 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 CAVIN3Q969G5 261 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 ZIC5Q96T25 663 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 PAGR1Q9BTK6 254 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 TLR10Q9BXR5 811 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 TEX13BQ9BXU2 312 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 FAM204AQ9H8W3 233 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 RNF146Q9NTX7 359 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 POTEB3A0JP26 581 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 SPDYE3A6NKU9 549 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 PIK3CDO00329 1044 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 CYP3A4P08684 503 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 HOXA13P31271 388 aaPredicted RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 NAP1L1P55209 391 aaKnown RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 GHRHRQ02643 423 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 PPFIA1Q13136 1202 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 C8orf74Q6P047 294 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 POTEBQ6S5H4 581 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 IFT20Q8IY31 132 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 SMCR8Q8TEV9 937 aaPredicted RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 CAPNS2Q96L46 248 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 POLR3CQ9BUI4 534 aaPredicted RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 GANQ9H2C0 597 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 R3HDMLQ9H3Y0 253 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 ARMCX3Q9UH62 379 aaPredicted RBP13.59□□□□□ -0.23
AFF3-215ENST00000498090 PNMA3Q9UL41 463 aa13.59□□□□□ -0.23
AFF3-215ENST00000498090 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.24
AFF3-215ENST00000498090 CFBP00751 764 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
AFF3-215ENST00000498090 EPB41P11171 864 aaKnown RBP13.58□□□□□ -0.24
AFF3-215ENST00000498090 GAP43P17677 238 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 MUTP22033 750 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 NR2F2P24468 414 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 STAT3P40763 770 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 HSD17B4P51659 736 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 GYS2P54840 703 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 SPIRE1Q08AE8 756 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 KCNH2Q12809 1159 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 GIT2Q14161 759 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 PLS1Q14651 629 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 NFIL3Q16649 462 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 NFRKBQ6P4R8 1299 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 EPM2AIP1Q7L775 607 aaPredicted RBP13.58□□□□□ -0.24
AFF3-215ENST00000498090 VPS36Q86VN1 386 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 GLIS3Q8NEA6 775 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 LRRC1Q9BTT6 524 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 SPATC1LQ9H0A9 340 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 PNMA2Q9UL42 364 aa13.58□□□□□ -0.24
AFF3-215ENST00000498090 TLR2O60603 784 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 AOC2O75106 756 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 MED24O75448 989 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 GFPT2O94808 682 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 XRCC5P13010 732 aaKnown RBP13.57□□□□□ -0.24
AFF3-215ENST00000498090 RAPGEF1Q13905 1077 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 Q3C1V9 767 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 ARSHQ5FYA8 562 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 MEI1Q5TIA1 1274 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 SLC30A10Q6XR72 485 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 CATSPER3Q86XQ3 398 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 RIOX2Q8IUF8 465 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 NELFCDQ8IXH7 590 aa13.57□□□□□ -0.24
AFF3-215ENST00000498090 FAM76AQ8TAV0 307 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms