RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CUL4BQ13620 913 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 SNX17Q15036 470 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 LRRC26Q2I0M4 334 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 ARSHQ5FYA8 562 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 TAF2Q6P1X5 1199 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 SERINC5Q86VE9 423 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 TCP11Q8WWU5 503 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 PSPC1Q8WXF1 523 aaKnown RBP15.04■□□□□ -0
CPNE1-227ENST00000498056 ERCC4Q92889 916 aaPredicted RBP15.04■□□□□ -0
CPNE1-227ENST00000498056 DRC1Q96MC2 740 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 TIPINQ9BVW5 301 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 CLSTN2Q9H4D0 955 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 POLD4Q9HCU8 107 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 ODF2LQ9ULJ1 636 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 PCDHA2Q9Y5H9 948 aa15.04■□□□□ -0
CPNE1-227ENST00000498056 IGKV6-21A0A0C4DH24 114 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 M0QZ92 97 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 PTK7Q13308 1070 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 CAMK4Q16566 473 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 CAVIN1Q6NZI2 390 aaKnown RBP15.03■□□□□ -0
CPNE1-227ENST00000498056 UBE2Q1Q7Z7E8 422 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 RHPN2Q8IUC4 686 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 LINC01465Q8N7H1 131 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 ASAP3Q8TDY4 903 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 DNAJB3Q8WWF6 145 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 KIFAP3Q92845 792 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 WNT8BQ93098 351 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 ZNF668Q96K58 619 aaPredicted RBP15.03■□□□□ -0
CPNE1-227ENST00000498056 NLRP4Q96MN2 994 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 CTAGE1Q96RT6 745 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 SUCLA2Q9P2R7 463 aaPredicted RBP15.03■□□□□ -0
CPNE1-227ENST00000498056 MICAL3Q7RTP6 2002 aa15.03■□□□□ -0
CPNE1-227ENST00000498056 SMIM35A0A1B0GVV1 85 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 DCDC2CA8MYV0 355 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 THPOP40225 353 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 CDK7P50613 346 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 TLE2Q04725 743 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 MAPK7Q13164 816 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 DMP1Q13316 513 aaPredicted RBP15.02■□□□□ -0
CPNE1-227ENST00000498056 GIT2Q14161 759 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 C1orf53Q5VUE5 145 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 IER5Q5VY09 327 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 SH3RF1Q7Z6J0 888 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 RSPH3Q86UC2 560 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 SFR1Q86XK3 245 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 CCDC65Q8IXS2 484 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 DAW1Q8N136 415 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 BSNDQ8WZ55 320 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 DHX38Q92620 1227 aaKnown RBP15.02■□□□□ -0
CPNE1-227ENST00000498056 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
CPNE1-227ENST00000498056 DNAJC19Q96DA6 116 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 C7orf25Q9BPX7 421 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 PRDM5Q9NQX1 630 aaPredicted RBP15.02■□□□□ -0
CPNE1-227ENST00000498056 EXOC1Q9NV70 894 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 GINS2Q9Y248 185 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 COL4A3BPQ9Y5P4 624 aa15.02■□□□□ -0
CPNE1-227ENST00000498056 MKI67P46013 3256 aaKnown RBP15.02□□□□□ -0.01
CPNE1-227ENST00000498056 LRRIQ4A6NIV6 560 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 K7ENM7 598 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 CD4P01730 458 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 RPN1P04843 607 aaKnown RBP15.01□□□□□ -0.01
CPNE1-227ENST00000498056 MYL1P05976 194 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 CLTBP09497 229 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 DPYDQ12882 1025 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 COASYQ13057 564 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-227ENST00000498056 CAPSQ13938 189 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 PPP2R5AQ15172 486 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 KLHL40Q2TBA0 621 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 CCDC183Q5T5S1 534 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 ANKRD33Q7Z3H0 272 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 KSR1Q8IVT5 923 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 MYCT1Q8N699 235 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 NLRP7Q8WX94 980 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 SMARCE1Q969G3 411 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 CCDC47Q96A33 483 aaKnown RBP15.01□□□□□ -0.01
CPNE1-227ENST00000498056 IFT74Q96LB3 600 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 KIFC3Q9BVG8 833 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 PARVGQ9HBI0 331 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 PDLIM7Q9NR12 457 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 PANK4Q9NVE7 773 aa15.01□□□□□ -0.01
CPNE1-227ENST00000498056 CCDC169A6NNP5 214 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 SFI1A8K8P3 1242 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 SMC2O95347 1197 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 GAP43P17677 238 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 GLRA2P23416 452 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 ARL2P36404 184 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 PEX3P56589 373 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 MRPS6P82932 125 aaKnown RBP15□□□□□ -0.01
CPNE1-227ENST00000498056 LAMTOR4Q0VGL1 99 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 TFDP1Q14186 410 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 MXD4Q14582 209 aaPredicted RBP15□□□□□ -0.01
CPNE1-227ENST00000498056 KIZQ2M2Z5 673 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 ODR4Q5SWX8 454 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 UNC13DQ70J99 1090 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 C7orf61Q8IZ16 206 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 KIAA0319LQ8IZA0 1049 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 TET1Q8NFU7 2136 aa15□□□□□ -0.01
CPNE1-227ENST00000498056 DEPTORQ8TB45 409 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms