RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 C16orf45Q96MC5 204 aaPredicted RBP8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 ERGIC2Q96RQ1 377 aa8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 FIZ1Q96SL8 496 aa8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 BAG1Q99933 345 aaPredicted RBP8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 SH2D3AQ9BRG2 576 aa8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 NAA15Q9BXJ9 866 aaKnown RBP8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 NDST4Q9H3R1 872 aa8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 BCAS3Q9H6U6 928 aa8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 ABHD10Q9NUJ1 306 aa8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 TRAF3IP3Q9Y228 551 aa8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 TELO2Q9Y4R8 837 aa8.88□□□□□ -0.99
PDZRN3-212ENST00000498048 EMSYQ7Z589 1322 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 MANSC4A6NHS7 340 aaPredicted RBP8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 NOP56O00567 594 aaKnown RBP8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 CLIC2O15247 247 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 STX10O60499 249 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 DGAT1O75907 488 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 ARIH2O95376 493 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 HOXD13P35453 343 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 POLGP54098 1239 aaPredicted RBP8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 NCKAP1LP55160 1127 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 SP2Q02086 613 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 PPP2R3AQ06190 1150 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 TBC1D8BQ0IIM8 1120 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 ADAM9Q13443 819 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 EMC2Q15006 297 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 NFIL3Q16649 462 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 XKR3Q5GH77 459 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 DCAF17Q5H9S7 520 aaPredicted RBP8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 TRIM59Q8IWR1 403 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 SYCP3Q8IZU3 236 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 CCAR2Q8N163 923 aaKnown RBP8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 MORC4Q8TE76 937 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 KIFAP3Q92845 792 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 FAM167AQ96KS9 214 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 ACCSQ96QU6 501 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 NUP58Q9BVL2 599 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 GBP3Q9H0R5 595 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 POLR3FQ9H1D9 316 aaPredicted RBP8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 MLXIPQ9HAP2 919 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 VTA1Q9NP79 307 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 GPRC5CQ9NQ84 441 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 CYP26B1Q9NR63 512 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 FAM184BQ9ULE4 1060 aa8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDZRN3-212ENST00000498048 USP27XA6NNY8 438 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 NKRFO15226 690 aaKnown RBP eCLIP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 OFD1O75665 1012 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 ITGBL1O95965 494 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 SLC10A3P09131 477 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 TGFB3P10600 412 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 XRCC5P13010 732 aaKnown RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 MAPK4P31152 587 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 KRT9P35527 623 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 TCF7P36402 384 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 KLK7P49862 253 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 CYP2J2P51589 502 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 ZNF157P51786 506 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 PEX3P56589 373 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 KCNA1Q09470 495 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 GRB14Q14449 540 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 TTLL4Q14679 1199 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 TAF1CQ15572 869 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 LY6KQ17RY6 165 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 TCERG1LQ5VWI1 586 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 CST9Q5W186 159 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 ZNF720Q7Z2F6 126 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 GPR142Q7Z601 462 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 FRMD5Q7Z6J6 570 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 KSR1Q8IVT5 923 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 FAM186BQ8IYM0 893 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 ABRAQ8N0Z2 381 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 RETREG2Q8NC44 543 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 AFAP1L1Q8TED9 768 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 SCFD2Q8WU76 684 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 PPP1R13BQ96KQ4 1090 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 LSM14BQ9BX40 385 aaKnown RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 TTYH3Q9C0H2 523 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 TMX1Q9H3N1 280 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 AZI2Q9H6S1 392 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 TMEM206Q9H813 350 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 METTL14Q9HCE5 456 aaKnown RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 ZCCHC17Q9NP64 241 aaKnown RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 KMT5AQ9NQR1 393 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 XPNPEP1Q9NQW7 623 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 AGPAT3Q9NRZ7 376 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 ARMCX3Q9UH62 379 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 SIK3Q9Y2K2 1263 aa8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 MAFBQ9Y5Q3 323 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-212ENST00000498048 PHLPP2Q6ZVD8 1323 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 SCN10AQ9Y5Y9 1956 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 IGKV6D-21A0A0A0MT36 114 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 A0A1W2PQJ5 194 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 GSTTP1A0A1W2PQM5 241 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 TTC26A0AVF1 554 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 SOWAHDA6NJG2 315 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 CCDC169A6NNP5 214 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 H0YCG3 227 aa8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 IGF2BP3O00425 579 aaKnown RBP eCLIP8.85□□□□□ -0.99
PDZRN3-212ENST00000498048 SLC16A4O15374 487 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms